RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SLC22A10Q63ZE4 541 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ATG9BQ674R7 924 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ZNF549Q6P9A3 640 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PRSS55Q6UWB4 352 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 DEF8Q6ZN54 512 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SSX6Q7RTT6 188 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 VSIG10LQ86VR7 867 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 C1QL4Q86Z23 238 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CBWD2Q8IUF1 395 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CCDC117Q8IWD4 279 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 TP53INP2Q8IXH6 220 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 PRSS58Q8IYP2 241 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CFAP206Q8IYR0 622 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 LRRC18Q8N456 261 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ZNF283Q8N7M2 679 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 B3GNT7Q8NFL0 401 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR9A1PQ8NGU1 263 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR2G2Q8NGZ5 317 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CD99L2Q8TCZ2 262 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SMAP2Q8WU79 429 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 LCN9Q8WX39 176 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CRYGNQ8WXF5 182 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TMEM203Q969S6 136 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 HIST1H2BAQ96A08 127 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TMEM143Q96AN5 459 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OTUB2Q96DC9 234 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TSPAN17Q96FV3 270 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 MARS2Q96GW9 593 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 MRGPRX4Q96LA9 322 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR2A7Q96R45 310 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 EPYCQ99645 322 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 THAP7Q9BT49 309 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 MENTQ9BUN1 341 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 TRIM2Q9C040 744 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 ARL6Q9H0F7 186 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 OR52A5Q9H2C5 316 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 CDCP1Q9H5V8 836 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 REEP1Q9H902 201 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GPN1Q9HCN4 374 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 SARS2Q9NP81 518 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 PRMT7Q9NVM4 692 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 ELOVL2Q9NXB9 296 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 SAGE1Q9NXZ1 904 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 GAR1Q9NY12 217 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 NFKBIL1Q9UBC1 381 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 MGAT4CQ9UBM8 478 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 RPS6KB2Q9UBS0 482 aa5.46□□□□□ -1.54
CD44-225ENST00000527326 LSM2Q9Y333 95 aaKnown RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 TP53BP1Q12888 1972 aaPredicted RBP5.46□□□□□ -1.54
CD44-225ENST00000527326 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 LOC105369274A0A096LPK9 316 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 A0A0D9SG52 128 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 A0A0U1RQV5 110 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 NAP1L6A6NFF2 107 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 NCF1BA6NI72 391 aaPredicted RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 NCF1CA8MVU1 366 aaPredicted RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 SEC14L6B5MCN3 397 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 TRDCB7Z8K6 153 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 K7ERQ8 282 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 ZNF593O00488 134 aaPredicted RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 ACKR2O00590 384 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 MAN2B1O00754 1011 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 MED7O43513 233 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 CHST10O43529 356 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 CACNG3O60359 315 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 OR10H2O60403 315 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 CILPO75339 1184 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 TOXO94900 526 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 ABLIM3O94929 683 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 FGF19O95750 216 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 MT-CO1P00395 513 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 PRNPP04156 253 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 FABP3P05413 133 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 THP07101 528 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 GUSBP08236 651 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 MMP10P09238 476 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 CLTBP09497 229 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 C6P13671 934 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 IL2RBP14784 551 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 ARSAP15289 507 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 PHKG2P15735 406 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 NQO2P16083 231 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 CPEP16870 476 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 MST1P26927 711 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 NDUFS1P28331 727 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 FGF9P31371 208 aaPredicted RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 GALNSP34059 522 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 THBS4P35443 961 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 SERPINF1P36955 418 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 SREBF1P36956 1147 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 NPBWR1P48145 328 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 RFX3P48380 749 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 SRP9P49458 86 aaKnown RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 DIO1P49895 249 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 SELENOPP49908 381 aa5.45□□□□□ -1.54
CD44-225ENST00000527326 ANXA11P50995 505 aaKnown RBP5.45□□□□□ -1.54
CD44-225ENST00000527326 CCR4P51679 360 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms