RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 RAPSNQ13702 412 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 KEAP1Q14145 624 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 C6orf141Q5SZD1 244 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 ATAD3BQ5T9A4 648 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 MFSD12Q6NUT3 480 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 TMEM205Q6UW68 189 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 AMER2Q8N7J2 671 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 VANGL1Q8TAA9 524 aaPredicted RBP17.4■□□□□ 0.38
SMPD1-203ENST00000527275 HDAC2Q92769 488 aaKnown RBP17.4■□□□□ 0.38
SMPD1-203ENST00000527275 SLC35A4Q96G79 324 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 YIPF3Q9GZM5 350 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 ADNPQ9H2P0 1102 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 RHCGQ9UBD6 479 aa17.4■□□□□ 0.38
SMPD1-203ENST00000527275 FFAR1O14842 300 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CD63P08962 238 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 IFI6P09912 130 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 RAB40ALP0C0E4 278 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 F8A1P23610 371 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 FOXC1Q12948 553 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 NPRL3Q12980 569 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 RBM48Q5RL73 367 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CDC73Q6P1J9 531 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 IGF2-ASQ6U949 168 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 ZNF321PQ8N8H1 164 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CHDHQ8NE62 594 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 PHF10Q8WUB8 498 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 DAZLQ92904 295 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 ZNF578Q96N58 590 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 GIN1Q9NXP7 522 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 KCND3Q9UK17 655 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 FARSAQ9Y285 508 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 GMPPBQ9Y5P6 360 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 DYRK3O43781 588 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 BRINP1O60477 761 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 DXOO77932 396 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 DDAH2O95865 285 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CYC1P08574 325 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 IL7RP16871 459 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 FUT4P22083 530 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 DLSTP36957 453 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 FOLR3P41439 243 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 ALDH3B2P48448 385 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 HLCSP50747 726 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 IL5RAQ01344 420 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 C16orf62Q7Z3J2 963 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 RBM45Q8IUH3 476 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 SLC16A11Q8NCK7 471 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 SETD9Q8NE22 299 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 OR4D11Q8NGI4 311 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 SLC2A12Q8TD20 617 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 ADAMTS16Q8TE57 1224 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 NKD1Q969G9 470 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 TRNT1Q96Q11 434 aaKnown RBP17.39■□□□□ 0.37
SMPD1-203ENST00000527275 WFDC6Q9BQY6 131 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 OR10A5Q9H207 317 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 RLIMQ9NVW2 624 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 CALML5Q9NZT1 146 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 AKAP13Q12802 2813 aa17.39■□□□□ 0.37
SMPD1-203ENST00000527275 SYNDIG1LA6NDD5 238 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CD82P27701 267 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 EPHA2P29317 976 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 EMDP50402 254 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 RPS15P62841 145 aaKnown RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CHRNEQ04844 493 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 FOXD4Q12950 439 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 RTP5Q14D33 572 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 COLEC12Q5KU26 742 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CPEB2Q7Z5Q1 589 aaKnown RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 HMGN2P46Q86SG4 172 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 DTX1Q86Y01 620 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 IL22RA1Q8N6P7 574 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 OR14A16Q8NHC5 309 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 DGCR14Q96DF8 476 aaKnown RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 ALPK1Q96QP1 1244 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 KLK13Q9UKR3 277 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 NDRG4Q9ULP0 352 aaKnown RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 LOC101059948A0A1B0GTJ6 334 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 TRABD2BA6NFA1 517 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 A8MVJ9 347 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 SEMA7AO75326 666 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CCNB2O95067 398 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 AGR2O95994 175 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CLPSP04118 112 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 IGKV3-11P04433 115 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 CRHBPP24387 322 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 EEF1B2P24534 225 aaKnown RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 DNASE1L3Q13609 305 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 TGIF1Q15583 401 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 DEF8Q6ZN54 512 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 LACC1Q8IV20 430 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 ZNF615Q8N8J6 731 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 C16orf52Q8NHV5 167 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 ZNF721Q8TF20 911 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 SLC9A6Q92581 669 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 WDR77Q9BQA1 342 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-203ENST00000527275 SLC38A1Q9H2H9 487 aa17.38■□□□□ 0.37
SMPD1-203ENST00000527275 NMNAT1Q9HAN9 279 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms