RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
CASP4-205ENST00000525116 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 CNOT11Q9UKZ1 510 aaKnown RBP6.29□□□□□ -1.4
CASP4-205ENST00000525116 ERVK-19Q9WJR5 959 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 EIF3LQ9Y262 564 aaKnown RBP6.29□□□□□ -1.4
CASP4-205ENST00000525116 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 CHCHD2Q9Y6H1 151 aaPredicted RBP6.29□□□□□ -1.4
CASP4-205ENST00000525116 IKBKGQ9Y6K9 419 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 MXRA5Q9NR99 2828 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 MPDZO75970 2070 aa6.29□□□□□ -1.4
CASP4-205ENST00000525116 WASHC1A8K0Z3 465 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TP53I11O14683 189 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TAPBPO15533 448 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 PLOD3O60568 738 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TRIM3O75382 744 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 SKAP2O75563 359 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 PRKRAO75569 313 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 TTC4O95801 387 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 GPANK1O95872 356 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 IGKV3-11P04433 115 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 PCNAP12004 261 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 ZNF37AP17032 561 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 ATP5A1P25705 553 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 GSTM2P28161 218 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 APOBEC3AP31941 199 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 RPL21P46778 160 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 CDK9P50750 372 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 FBXW4P57775 412 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TAS2R39P59534 338 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SORDQ00796 357 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SRYQ05066 204 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TBL3Q12788 808 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 IFT88Q13099 833 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SF3B4Q15427 424 aaKnown RBP eCLIP6.28□□□□□ -1.4
CASP4-205ENST00000525116 PPP1R7Q15435 360 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 HIST2H2ACQ16777 129 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 AP5B1Q2VPB7 878 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 RNASEH2BQ5TBB1 312 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 HIST2H2AA3Q6FI13 130 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 YRDCQ86U90 279 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 GAS2L3Q86XJ1 694 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 CNTN4Q8IWV2 1026 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 PRR22Q8IZ63 422 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SPATA3Q8NHX4 192 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 NUBPLQ8TB37 319 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SLC44A1Q8WWI5 657 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 ABTB1Q969K4 478 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 INTS12Q96CB8 462 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 RHBDF1Q96CC6 855 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 WDYHV1Q96HA8 205 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 FBXL20Q96IG2 436 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 RILPQ96NA2 401 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 DACH2Q96NX9 599 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 TBCDQ9BTW9 1192 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 CAPS2Q9BXY5 557 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 UGT2B28Q9BY64 529 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 ROGDIQ9GZN7 287 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 WWTR1Q9GZV5 400 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 RPF2Q9H7B2 306 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 UBTD1Q9HAC8 227 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 PLAC1Q9HBJ0 212 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SMYD2Q9NRG4 433 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 DNAJC11Q9NVH1 559 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.28□□□□□ -1.4
CASP4-205ENST00000525116 ETAA1Q9NY74 926 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 WWOXQ9NZC7 414 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 MID2Q9UJV3 735 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 ADAM21Q9UKJ8 722 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 CHMP2BQ9UQN3 213 aa6.28□□□□□ -1.4
CASP4-205ENST00000525116 MTO1Q9Y2Z2 717 aaKnown RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 MAGED1Q9Y5V3 778 aaPredicted RBP6.28□□□□□ -1.4
CASP4-205ENST00000525116 CUBNO60494 3623 aa6.27□□□□□ -1.4
CASP4-205ENST00000525116 C2orf92A0A1B0GVN3 265 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 MBD3L5A6NJ08 208 aaPredicted RBP6.27□□□□□ -1.41
CASP4-205ENST00000525116 CD8B2A6NJW9 211 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 GLOD5A6NK44 160 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 RRP9O43818 475 aaKnown RBP6.27□□□□□ -1.41
CASP4-205ENST00000525116 OR10H2O60403 315 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 CCNT2O60583 730 aaKnown RBP6.27□□□□□ -1.41
CASP4-205ENST00000525116 BAG2O95816 211 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 HPNP05981 417 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 CCDC159P0C7I6 412 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 CYP4B1P13584 511 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 CD22P20273 847 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 HIST1H1TP22492 207 aaPredicted RBP6.27□□□□□ -1.41
CASP4-205ENST00000525116 CPOXP36551 454 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 ELK3P41970 407 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 SSR2P43308 183 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 RAD52P43351 418 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 SLCO1A2P46721 670 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 ALDH9A1P49189 494 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 NAGLUP54802 743 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 LOXL3P58215 753 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 CDKL1Q00532 357 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 PLIN5Q00G26 463 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 IRF8Q02556 426 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 DDX39BQ13838 428 aaKnown RBP6.27□□□□□ -1.41
CASP4-205ENST00000525116 RCAN2Q14206 197 aa6.27□□□□□ -1.41
CASP4-205ENST00000525116 NTRK2Q16620 822 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms