RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PKNOX2Q96KN3 472 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 PRPF18Q99633 342 aaKnown RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 G6PC3Q9BUM1 346 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 SFXN3Q9BWM7 321 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 ZCCHC3Q9NUD5 404 aaKnown RBP14.69□□□□□ -0.06
CLN8-206ENST00000523237 CLCF1Q9UBD9 225 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 RAB21Q9UL25 225 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 POLQO75417 2590 aa14.69□□□□□ -0.06
CLN8-206ENST00000523237 WDR91A4D1P6 747 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 LINC01387J3KSC0 135 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 TM9SF1O15321 606 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 BIRC5O15392 142 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 SERPINE1P05121 402 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 ALOX5P09917 674 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 LAMP1P11279 417 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 POU3F2P20265 443 aaPredicted RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 PRPS1L1P21108 318 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 PRIM2P49643 509 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 EEF1A1P68104 462 aaKnown RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 MAD2L1Q13257 205 aaPredicted RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLN8-206ENST00000523237 CPTPQ5TA50 214 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 EEF1A1P5Q5VTE0 462 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 KIF18BQ86Y91 864 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 MEIOBQ8N635 442 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 FBXO30Q8TB52 745 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 JADE3Q92613 823 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 FAM120BQ96EK7 910 aaKnown RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 PIGQQ9BRB3 760 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 CENPHQ9H3R5 247 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 SIRT3Q9NTG7 399 aaPredicted RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 CRIM1Q9NZV1 1036 aa14.68□□□□□ -0.06
CLN8-206ENST00000523237 EIF3LQ9Y262 564 aaKnown RBP14.68□□□□□ -0.06
CLN8-206ENST00000523237 IGLV3-32A0A0A0MS00 114 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 ALG1L2C9J202 215 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 HCRTR2O43614 444 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 KCNK2O95069 426 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 SNUPNO95149 360 aaKnown RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 OXSR1O95747 527 aaPredicted RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 TUBBP07437 444 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 NGFRP08138 427 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 LCN1P31025 176 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 EEFSECP57772 596 aaKnown RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 FOXF2Q12947 444 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 CHI3L2Q15782 390 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 DUSP5Q16690 384 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 LSM12Q3MHD2 195 aaKnown RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 GLYR1Q49A26 553 aaPredicted RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 FLYWCH1Q4VC44 716 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 CEP85LQ5SZL2 805 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 FIGNL1Q6PIW4 674 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 PLXDC2Q6UX71 529 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 APOOLQ6UXV4 268 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 GALNT10Q86SR1 603 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 UBQLNLQ8IYU4 475 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 GCNT2Q8N0V5 402 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 COX18Q8N8Q8 333 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 OR4C3Q8NH37 302 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 FAM110BQ8TC76 370 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 FAM222BQ8WU58 562 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 OR5P2Q8WZ92 322 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 INTS12Q96CB8 462 aaKnown RBP14.67□□□□□ -0.06
CLN8-206ENST00000523237 C16orf58Q96GQ5 468 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 ZIM3Q96PE6 472 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 YIPF4Q9BSR8 244 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 JKAMPQ9P055 326 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 ZNF337Q9Y3M9 751 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 SNX8Q9Y5X2 465 aa14.67□□□□□ -0.06
CLN8-206ENST00000523237 NUP214P35658 2090 aaPredicted RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 OR2M5A3KFT3 312 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 NDUFB5O43674 189 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 ITM2AO43736 263 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 CTAG2O75638 210 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 HMGN2P05204 90 aaKnown RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 HPGDP15428 266 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 TBXA2RP21731 343 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 DIO3P55073 304 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 ABCE1P61221 599 aaKnown RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 POU6F2P78424 691 aaPredicted RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 SORDQ00796 357 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 EMX2Q04743 252 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 LASP1Q14847 261 aaKnown RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 SMU1Q2TAY7 513 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 P4HA3Q7Z4N8 544 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 CROCCP2Q86T23 111 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 PSMA8Q8TAA3 256 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 COQ8BQ96D53 544 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 OTUB1Q96FW1 271 aaPredicted RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 CHMP6Q96FZ7 201 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 STACQ99469 402 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 PIGMQ9H3S5 423 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 UBQLN4Q9NRR5 601 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 DUSP22Q9NRW4 184 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 GIN1Q9NXP7 522 aa14.66□□□□□ -0.06
CLN8-206ENST00000523237 DNAJB12Q9NXW2 375 aaKnown RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 NOP53Q9NZM5 478 aaKnown RBP14.66□□□□□ -0.06
CLN8-206ENST00000523237 ANKHD1Q8IWZ3 2542 aaKnown RBP14.65□□□□□ -0.06
CLN8-206ENST00000523237 TUBAL3A6NHL2 446 aa14.65□□□□□ -0.06
CLN8-206ENST00000523237 SLC22A20A6NK97 555 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms