RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HLXQ14774 488 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SLC9A3R2Q15599 337 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TRAM1Q15629 374 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TBCEQ15813 527 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MTX3Q5HYI7 312 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 DCAF10Q5QP82 559 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 OR8G2PQ6IF36 304 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 FIGNL1Q6PIW4 674 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 FIGLAQ6QHK4 219 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 KLHL17Q6TDP4 642 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CRTC3Q6UUV7 619 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 EIF3MQ7L2H7 374 aaKnown RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TRABD2AQ86V40 505 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 WDR5BQ86VZ2 330 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 C8orf59Q8N0T1 100 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PUSL1Q8N0Z8 303 aaKnown RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PARP8Q8N3A8 854 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 FAM86B1Q8N7N1 296 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 POC5Q8NA72 575 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 GATSQ8NAP1 163 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PIH1D2Q8WWB5 315 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 HSD17B8Q92506 261 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SPSB1Q96BD6 273 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MED8Q96G25 268 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 LOXL4Q96JB6 756 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 LCORQ96JN0 433 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MEGF10Q96KG7 1140 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 HSFY1Q96LI6 401 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SPATA13Q96N96 652 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SLC46A1Q96NT5 459 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 KLHDC3Q9BQ90 382 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 NAA11Q9BSU3 229 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MED10Q9BTT4 135 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 KATNB1Q9BVA0 655 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 UGT2B28Q9BY64 529 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 ACTRT3Q9BYD9 372 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 COMMD4Q9H0A8 199 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CLEC4MQ9H2X3 399 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MUC13Q9H3R2 512 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM138Q9NPI0 162 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 OSER1Q9NX31 292 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 VNN3Q9NY84 501 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SLC17A7Q9P2U7 560 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 RWDD2AQ9UIY3 292 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 ZFP69BQ9UJL9 534 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PLXND1Q9Y4D7 1925 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 MYO18AQ92614 2054 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 A0A087X1B8 175 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 A0A1B0GTW7 788 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF840PA6NDX5 716 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CLCA1A8K7I4 914 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CDIPTO14735 213 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 B3GALT2O43825 422 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CREG1O75629 220 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 OR2B3O76000 313 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 LRIG2O94898 1065 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 NDUFA10O95299 355 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 IFNA17P01571 189 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 C9P02748 559 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 UROSP10746 265 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PNLIPP16233 465 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 LMO2P25791 158 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ABCD3P28288 659 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ACADLP28330 430 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 GJA4P35212 333 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 HSD17B3P37058 310 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 FMO5P49326 533 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 NDUFA8P51970 172 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 FGF8P55075 233 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 WNT4P56705 351 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 RPL23AP62750 156 aaKnown RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 TNK2Q07912 1038 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PDZK1IP1Q13113 114 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SLAMF1Q13291 335 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PTPRCAPQ14761 206 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 GPR68Q15743 365 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PARP15Q460N3 678 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SFT2D3Q587I9 215 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 Q5BKY6 102 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 CERCAMQ5T4B2 595 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 GPR157Q5UAW9 335 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 MBOAT1Q6ZNC8 495 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 SYT13Q7L8C5 426 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 PDZD3Q86UT5 571 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 TMPRSS6Q8IU80 811 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 STPG2Q8N412 459 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 FRMD1Q8N878 549 aa7.06□□□□□ -1.28
HDAC3-216ENST00000523088 ARL14EPQ8N8R7 260 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-216ENST00000523088 OR10H5Q8NGA6 315 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms