RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TMEM200AQ86VY9 491 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 PPP1R14CQ8TAE6 165 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 NRGNQ92686 78 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 WNT2BQ93097 391 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 INTS12Q96CB8 462 aaKnown RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 TUBGCP3Q96CW5 907 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 FAM120BQ96EK7 910 aaKnown RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 MS4A4EQ96PG1 132 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 TBL1XR1Q9BZK7 514 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 JKAMPQ9P055 326 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 EEF1E1-BLOC1S5C9J1V9 151 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 EEF1E1O43324 174 aaKnown RBP16.89■□□□□ 0.29
SPIDR-220ENST00000522900 OXSR1O95747 527 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-220ENST00000522900 HSPA4LO95757 839 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 CLK3P49761 638 aaKnown RBP16.89■□□□□ 0.29
SPIDR-220ENST00000522900 SUCLG1P53597 346 aaKnown RBP16.89■□□□□ 0.29
SPIDR-220ENST00000522900 BCL2A1Q16548 175 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 CPTPQ5TA50 214 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 RAET1LQ5VY80 246 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 GCNT2Q8N0V5 402 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 ZNF781Q8N8C0 355 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 COQ8BQ96D53 544 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 PPP1R36Q96LQ0 422 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 ZIM3Q96PE6 472 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 TM9SF2Q99805 663 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 CENPHQ9H3R5 247 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 CXorf36Q9H7Y0 433 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.29
SPIDR-220ENST00000522900 ZCCHC3Q9NUD5 404 aaKnown RBP16.89■□□□□ 0.29
SPIDR-220ENST00000522900 IGLV3-32A0A0A0MS00 114 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 OR2M5A3KFT3 312 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 SHISA8B8ZZ34 492 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 HCRTR2O43614 444 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 ZWINTO95229 277 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 IL18BPO95998 194 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 SERPINE1P05121 402 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 HMGN2P05204 90 aaKnown RBP16.88■□□□□ 0.29
SPIDR-220ENST00000522900 ALOX5P09917 674 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 DHRS4L1P0CG22 281 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 G6PDP11413 515 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 DIO3P55073 304 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 ABCE1P61221 599 aaKnown RBP16.88■□□□□ 0.29
SPIDR-220ENST00000522900 C17orf67Q0P5P2 114 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 TNFAIP8L3Q5GJ75 292 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 CEP85LQ5SZL2 805 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 RIMKLAQ8IXN7 391 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 GATSQ8NAP1 163 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 NPAS1Q99742 590 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 KLHDC3Q9BQ90 382 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 PTGES2Q9H7Z7 377 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 SSU72Q9NP77 194 aaKnown RBP16.88■□□□□ 0.29
SPIDR-220ENST00000522900 SNX8Q9Y5X2 465 aa16.88■□□□□ 0.29
SPIDR-220ENST00000522900 ESPNB1AK53 854 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 BIRC5O15392 142 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 CTAG2O75638 210 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 C6orf47O95873 294 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 PEPDP12955 493 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 PRPS1L1P21108 318 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 TBXA2RP21731 343 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 RPL3P39023 403 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 CCT3P49368 545 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 GANABQ14697 944 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 LASP1Q14847 261 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 PDCD2Q16342 344 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 ZCCHC12Q6PEW1 402 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 LUZP2Q86TE4 346 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 GRAMD2AQ8IUY3 354 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 LINC01560Q8TB33 94 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 OR5P2Q8WZ92 322 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 JADE3Q92613 823 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 CDS1Q92903 461 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 SORT1Q99523 831 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 GPATCH1Q9BRR8 931 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 KCNK9Q9NPC2 374 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 DNAJB12Q9NXW2 375 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 EIF3LQ9Y262 564 aaKnown RBP16.87■□□□□ 0.29
SPIDR-220ENST00000522900 KCNE3Q9Y6H6 103 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 AKAP9Q99996 3911 aa16.87■□□□□ 0.29
SPIDR-220ENST00000522900 ALG1L2C9J202 215 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 H3BML4 177 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 SEC14L5O43304 696 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 BGNP21810 368 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 PRIM2P49643 509 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 CLDN20P56880 219 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 EMX2Q04743 252 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 TESK1Q15569 626 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 TMEM44Q2T9K0 475 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 COX18Q8N8Q8 333 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 PSMA8Q8TAA3 256 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 FIG4Q92562 907 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 LRRC46Q96FV0 321 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 ZFP3Q96NJ6 502 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 PIGQQ9BRB3 760 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 SFXN3Q9BWM7 321 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 AKTIPQ9H8T0 292 aa16.86■□□□□ 0.29
SPIDR-220ENST00000522900 FOXD3Q9UJU5 478 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms