RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 LRFN5Q96NI6 719 aa14.28□□□□□ -0.12
CTNNA1-236ENST00000522792 CFL2Q9Y281 166 aa14.28□□□□□ -0.12
CTNNA1-236ENST00000522792 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
CTNNA1-236ENST00000522792 NINQ8N4C6 2090 aa14.28□□□□□ -0.12
CTNNA1-236ENST00000522792 TTC36A6NLP5 189 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 CPSF4LA6NMK7 179 aaKnown RBP14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 BCAS1O75363 584 aaPredicted RBP14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 STK17BO94768 372 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 RAB15P59190 212 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 EIPR1Q53HC9 387 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 HES3Q5TGS1 186 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 PIP4P1Q86T03 277 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 OFCC1Q8IZS5 231 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 SLC5A8Q8N695 610 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 ARSGQ96EG1 525 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 LCORQ96JN0 433 aaPredicted RBP14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 PRRC1Q96M27 445 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 FEVQ99581 238 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 G6PC3Q9BUM1 346 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 FNDC11Q9BVV2 318 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 ANKRD60Q9BZ19 345 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 ACAD8Q9UKU7 415 aa14.27□□□□□ -0.12
CTNNA1-236ENST00000522792 A0A1W2PNU3 283 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 SAGE2PA6NJ88 616 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 C9J4A7 227 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 TMX2-CTNND1H3BSU7 103 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 SEC24DO94855 1032 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 CCNB2O95067 398 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 GKN3PP0CG01 181 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 ELAVL4P26378 380 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 POLR2IP36954 125 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 NBL1P41271 181 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 NR0B1P51843 470 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 HMGA2P52926 109 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 TAS2R41P59536 307 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 ADARB1P78563 741 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 KCNAB2Q13303 367 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 HLA-DQA1Q5Y7H0 255 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 FAHD1Q6P587 224 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 PAPD4Q6PIY7 484 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 UGT2A3Q6UWM9 527 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 SLC29A4Q7RTT9 530 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 SLCO6A1Q86UG4 719 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 LSRQ86X29 649 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 LIN37Q96GY3 246 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 NR1H4Q96RI1 486 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 WWTR1Q9GZV5 400 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 RIBC2Q9H4K1 309 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 LIN28AQ9H9Z2 209 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 KRT84Q9NSB2 600 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 PCDHGA1Q9Y5H4 931 aa14.27□□□□□ -0.13
CTNNA1-236ENST00000522792 SYNDIG1LA6NDD5 238 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 FRG2CA6NGY1 282 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 AP3D1O14617 1153 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 CYP4B1P13584 511 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 PRG2P13727 222 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 DRD5P21918 477 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 RAD23AP54725 363 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 SEC23BQ15437 767 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 DECR1Q16698 335 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 CPEB2Q7Z5Q1 589 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 PIK3C3Q8NEB9 887 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 B3GNT7Q8NFL0 401 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 DHRS1Q96LJ7 313 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 RDH12Q96NR8 316 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 DEPDC7Q96QD5 511 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 MCHR1Q99705 422 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 WDR54Q9H977 334 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 FAM118AQ9NWS6 357 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 FLRT3Q9NZU0 649 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 TMCC3Q9ULS5 477 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 PTRH2Q9Y3E5 179 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
CTNNA1-236ENST00000522792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 POU2F1P14859 743 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 GPR143P51810 404 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 PLAURQ03405 335 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 NCF4Q15080 339 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 C3orf38Q5JPI3 329 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 ENTPD8Q5MY95 495 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 DCST1Q5T197 706 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 KRT80Q6KB66 452 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 PLEKHM3Q6ZWE6 761 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 ZNF555Q8NEP9 628 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 NFAM1Q8NET5 270 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 OR4C3Q8NH37 302 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 PMM1Q92871 262 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 GATA6Q92908 595 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 TAAR9Q96RI9 348 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 NIPSNAP1Q9BPW8 284 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 WDR77Q9BQA1 342 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 MAN2C1Q9NTJ4 1040 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 ZNF223Q9UK11 482 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 NXT1Q9UKK6 140 aaKnown RBP14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 PCDHGA10Q9Y5H3 936 aa14.25□□□□□ -0.13
CTNNA1-236ENST00000522792 WDFY3Q8IZQ1 3526 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms