RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SLC16A11Q8NCK7 471 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 OR7A2PQ8NGA2 310 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 FIG4Q92562 907 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 HOXB13Q92826 284 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-209ENST00000522243 PPP3R2Q96LZ3 170 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 C3orf30Q96M34 536 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 MS4A4EQ96PG1 132 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 C1orf50Q9BV19 199 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 ACSS1Q9NUB1 689 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-209ENST00000522243 ZDHHC2Q9UIJ5 367 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 SLC22A20A6NK97 555 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 SKAP2O75563 359 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-209ENST00000522243 CLDN20P56880 219 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 PRR5P85299 388 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 SORDQ00796 357 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 C17orf67Q0P5P2 114 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 GANABQ14697 944 aaKnown RBP18.68■□□□□ 0.58
SDCBP-209ENST00000522243 DAZAP2Q15038 168 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-209ENST00000522243 DUSP5Q16690 384 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 VPS26BQ4G0F5 336 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 R3HCC1LQ7Z5L2 792 aaKnown RBP18.68■□□□□ 0.58
SDCBP-209ENST00000522243 ZAR1Q86SH2 424 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 OR4C3Q8NH37 302 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 NUDT8Q8WV74 236 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 MTERF3Q96E29 417 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 PINK1Q9BXM7 581 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 SIRT3Q9NTG7 399 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-209ENST00000522243 FBXO34Q9NWN3 711 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 NTMQ9P121 344 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 ST6GALNAC2Q9UJ37 374 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 PACSIN3Q9UKS6 424 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 PLEKHA6Q9Y2H5 1048 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 CCDC168Q8NDH2 2452 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 F8P00451 2351 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 MED13LQ71F56 2210 aa18.68■□□□□ 0.58
SDCBP-209ENST00000522243 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 A0A1W2PNV4 684 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 TMEM114B3SHH9 223 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 SCAMP2O15127 329 aaKnown RBP18.67■□□□□ 0.58
SDCBP-209ENST00000522243 TNFSF13O75888 250 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 KCNK2O95069 426 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 OXSR1O95747 527 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-209ENST00000522243 BPGMP07738 259 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 CD1EP15812 388 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 CPOXP36551 454 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 XKR7Q5GH72 579 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 CCNJQ5T5M9 372 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 MFSD12Q6NUT3 480 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 CNEP1R1Q8N9A8 125 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 JADE3Q92613 823 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 FAM120BQ96EK7 910 aaKnown RBP18.67■□□□□ 0.58
SDCBP-209ENST00000522243 CHMP6Q96FZ7 201 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 ZNF845Q96IR2 970 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-209ENST00000522243 PIGQQ9BRB3 760 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 PIGMQ9H3S5 423 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 ZCCHC3Q9NUD5 404 aaKnown RBP18.67■□□□□ 0.58
SDCBP-209ENST00000522243 ATP6V1HQ9UI12 483 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 VDAC3Q9Y277 283 aa18.67■□□□□ 0.58
SDCBP-209ENST00000522243 A0A1W2PRB8 838 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 A8MXE2 369 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 NDUFB5O43674 189 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 SMNDC1O75940 238 aaKnown RBP eCLIP18.66■□□□□ 0.58
SDCBP-209ENST00000522243 ALOX5P09917 674 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 LAMP1P11279 417 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 MAPK1P28482 360 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 HPCAL1P37235 193 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 DIO3P55073 304 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 SIRPAP78324 504 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 PTGR1Q14914 329 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 POU4F3Q15319 338 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 ATP6AP1LQ52LC2 224 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 IL23RQ5VWK5 629 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 VWA1Q6PCB0 445 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 EMBQ6PCB8 327 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 LRIG3Q6UXM1 1119 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 COX18Q8N8Q8 333 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 FAM110BQ8TC76 370 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 SNX8Q9Y5X2 465 aa18.66■□□□□ 0.58
SDCBP-209ENST00000522243 TACC2O95359 2948 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 IGLV3-32A0A0A0MS00 114 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 WDR91A4D1P6 747 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 ALG1L2C9J202 215 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 PRIM2P49643 509 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 EEFSECP57772 596 aaKnown RBP18.65■□□□□ 0.58
SDCBP-209ENST00000522243 LASP1Q14847 261 aaKnown RBP18.65■□□□□ 0.58
SDCBP-209ENST00000522243 C6orf136Q5SQH8 315 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 HOMEZQ8IX15 550 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 KRTCAP2Q8N6L1 136 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 FNDC5Q8NAU1 212 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 OR6Y1Q8NGX8 325 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 FNDC9Q8TBE3 224 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 NINJ1Q92982 152 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 CAVIN3Q969G5 261 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 STARD4Q96DR4 205 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 PKNOX2Q96KN3 472 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 NPAS1Q99742 590 aa18.65■□□□□ 0.58
SDCBP-209ENST00000522243 LINC01387J3KSC0 135 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 TYROBPO43914 113 aa18.64■□□□□ 0.57
SDCBP-209ENST00000522243 TNFRSF21O75509 655 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms