RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ALG2Q9H553 416 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 VAPAQ9P0L0 249 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 CIDEBQ9UHD4 219 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 SNX6Q9UNH7 406 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 DLGAP4Q9Y2H0 992 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 HEBP2Q9Y5Z4 205 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 AP4B1Q9Y6B7 739 aa6.65□□□□□ -1.34
CTNNA1-227ENST00000521387 TRBV5-3A0A0A0MS03 114 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 DHRS12A0PJE2 317 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PABPN1LA6NDY0 278 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SAC3D1A6NKF1 404 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SHISA8B8ZZ34 492 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 EEF1E1-BLOC1S5C9J1V9 151 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 NPIPB8E9PQR5 432 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 H0YJX3 145 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PLOD2O00469 737 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SOCS2O14508 198 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CDK2AP1O14519 115 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 EEF1E1O43324 174 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 AKAP10O43572 662 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 KCNH1O95259 989 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 EPPINO95925 133 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PLAUP00749 431 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 IGHV4-39P01824 125 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CATP04040 527 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SMIM18P0DKX4 95 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PRPS2P11908 318 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GABRA1P14867 456 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CRYGSP22914 178 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TIMP3P35625 211 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 MC3RP41968 323 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CHN2P52757 468 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 MTPNP58546 118 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 MAT1AQ00266 395 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 IRF8Q02556 426 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 NAE1Q13564 534 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 DOC2AQ14183 400 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GK3PQ14409 553 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ETFDHQ16134 617 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 NRF1Q16656 503 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GTDC1Q4AE62 458 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 BCL7AQ4VC05 210 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SYTL3Q4VX76 610 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 RNF220Q5VTB9 566 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 LIPJQ5W064 366 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GLYATQ6IB77 296 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ABHD17CQ6PCB6 329 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 AGTRAPQ6RW13 159 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ANKRD37Q7Z713 158 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 HOMEZQ8IX15 550 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 RIMKLAQ8IXN7 391 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SLC22A15Q8IZD6 547 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TMEM251Q8N6I4 163 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GOLM1Q8NBJ4 401 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GLB1L3Q8NCI6 653 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PAPD5Q8NDF8 572 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TRPV3Q8NET8 790 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ELP5Q8TE02 316 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SLC13A3Q8WWT9 602 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 EME1Q96AY2 570 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ART5Q96L15 291 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 FCRL1Q96LA6 429 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 LINC00615Q96LM1 132 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ZNF597Q96LX8 424 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CCDC138Q96M89 665 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TSSK3Q96PN8 268 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 CIB1Q99828 191 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 INPP5KQ9BT40 448 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 YIPF2Q9BWQ6 316 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 RBM24Q9BX46 236 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 TTTY12Q9BZ98 90 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PAIP1Q9H074 479 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 ELOVL6Q9H5J4 265 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 IKZF5Q9H5V7 419 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 RPF2Q9H7B2 306 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 MVB12BQ9H7P6 319 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SLC6A13Q9NSD5 602 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 C14orf105Q9NVL8 296 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 SLC25A37Q9NYZ2 338 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 GPRC5BQ9NZH0 403 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 AURKCQ9UQB9 309 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 PRR14LQ5THK1 2151 aa6.64□□□□□ -1.35
CTNNA1-227ENST00000521387 A0A096LPI6 279 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM157AC9JC47 383 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 TGFBR3LH3BV60 316 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 DLGAP1O14490 977 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 CLGNO14967 610 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 ACOX3O15254 700 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 OIP5O43482 229 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 FOXS1O43638 330 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 TPST1O60507 370 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 TMCC2O75069 709 aa6.63□□□□□ -1.35
CTNNA1-227ENST00000521387 C1orf105O95561 183 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms