RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CROCCP2Q86T23 111 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 PSMA8Q8TAA3 256 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 OR5P2Q8WZ92 322 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 RNASE6Q93091 150 aaKnown RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 WNT2BQ93097 391 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 FAM120BQ96EK7 910 aaKnown RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 LRRC46Q96FV0 321 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 RMND5BQ96G75 393 aaPredicted RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 C16orf58Q96GQ5 468 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 PRPF18Q99633 342 aaKnown RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 TM9SF2Q99805 663 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 ZNF559Q9BR84 538 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 TBL1XR1Q9BZK7 514 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 PTGES2Q9H7Z7 377 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 ATAD3AQ9NVI7 634 aa15.44■□□□□ 0.06
SQLE-205ENST00000521232 FOXD3Q9UJU5 478 aaPredicted RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 EIF3LQ9Y262 564 aaKnown RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.44■□□□□ 0.06
SQLE-205ENST00000521232 CELSR1Q9NYQ6 3014 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 CLCA1A8K7I4 914 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 LINC01387J3KSC0 135 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 KCNK2O95069 426 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ANGPTL1O95841 491 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 NGFRP08138 427 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ALOX5P09917 674 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 PEPDP12955 493 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 HK1P19367 917 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 PRPS1L1P21108 318 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 LCN1P31025 176 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 PRIM2P49643 509 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 C21orf58P58505 322 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 STX5Q13190 355 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 MAD2L1Q13257 205 aaPredicted RBP15.43■□□□□ 0.06
SQLE-205ENST00000521232 DUSP5Q16690 384 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.43■□□□□ 0.06
SQLE-205ENST00000521232 GLYR1Q49A26 553 aaPredicted RBP15.43■□□□□ 0.06
SQLE-205ENST00000521232 SZRD1Q7Z422 152 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 KRTCAP2Q8N6L1 136 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ZNF781Q8N8C0 355 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 OR4C3Q8NH37 302 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 GOT1L1Q8NHS2 421 aaPredicted RBP15.43■□□□□ 0.06
SQLE-205ENST00000521232 NUDT8Q8WV74 236 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 C1GALT1C1Q96EU7 318 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 PGM2Q96G03 612 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ZFP3Q96NJ6 502 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 C20orf27Q9GZN8 174 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 CENPHQ9H3R5 247 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 GIN1Q9NXP7 522 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ASIC5Q9NY37 505 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 JKAMPQ9P055 326 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 CLCF1Q9UBD9 225 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 RAP2CQ9Y3L5 183 aa15.43■□□□□ 0.06
SQLE-205ENST00000521232 ALG1L2C9J202 215 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 ZWINTO95229 277 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 HMGN2P05204 90 aaKnown RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 TMIGD3P0DMS9 266 aaPredicted RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 G6PDP11413 515 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 TBXA2RP21731 343 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 TCEA1P23193 301 aaKnown RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 UQCRC1P31930 480 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 AGFG1P52594 562 aaKnown RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 DGKQP52824 942 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 CLDN8P56748 225 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 MYBPHQ13203 477 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 LSM12Q3MHD2 195 aaKnown RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 STACQ99469 402 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 SORT1Q99523 831 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 BHLHE41Q9C0J9 482 aaPredicted RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 HHATLQ9HCP6 504 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 KCNK9Q9NPC2 374 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 DUSP22Q9NRW4 184 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 ZCCHC3Q9NUD5 404 aaKnown RBP15.42■□□□□ 0.06
SQLE-205ENST00000521232 HAO1Q9UJM8 370 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 ZNF337Q9Y3M9 751 aa15.42■□□□□ 0.06
SQLE-205ENST00000521232 OR2M5A3KFT3 312 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 HCRTR2O43614 444 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 OXSR1O95747 527 aaPredicted RBP15.41■□□□□ 0.06
SQLE-205ENST00000521232 KIR2DL3P43628 341 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 SLC1A6P48664 564 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 CCT3P49368 545 aaKnown RBP15.41■□□□□ 0.06
SQLE-205ENST00000521232 RPL14P50914 215 aaKnown RBP15.41■□□□□ 0.06
SQLE-205ENST00000521232 CLDN15P56746 228 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 FOXF2Q12947 444 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 FIGNL1Q6PIW4 674 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 CAMKMTQ7Z624 323 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 COX18Q8N8Q8 333 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 FBXO30Q8TB52 745 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 PIGQQ9BRB3 760 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 YIPF4Q9BSR8 244 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 SFXN3Q9BWM7 321 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 BTBD2Q9BX70 525 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 PIGUQ9H490 435 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 CXorf36Q9H7Y0 433 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 AKTIPQ9H8T0 292 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 UBQLN4Q9NRR5 601 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 FBXO34Q9NWN3 711 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 NOP53Q9NZM5 478 aaKnown RBP15.41■□□□□ 0.06
SQLE-205ENST00000521232 SNX8Q9Y5X2 465 aa15.41■□□□□ 0.06
SQLE-205ENST00000521232 TEP1Q99973 2627 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms