RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MMP11P24347 488 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PSMB5P28074 263 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 NDUFS1P28331 727 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PEBP1P30086 187 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 FGF9P31371 208 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 TGFBR1P36897 503 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 IFNGR2P38484 337 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 STAT5AP42229 794 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SSR2P43308 183 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 GIPRP48546 466 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SMSP52788 366 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 CASP9P55211 416 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 STXBP1P61764 594 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 B2MP61769 119 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 RPS21P63220 83 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 PRR5P85299 388 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 DAB2P98082 770 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 RAB40BQ12829 278 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 HSPB3Q12988 150 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 TSPAN31Q12999 210 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 TSTA3Q13630 321 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 TPBGQ13641 420 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SPHARQ15513 63 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SYPL1Q16563 259 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 MINDY4Q4G0A6 757 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 KLHL22Q53GT1 634 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SYT14P1Q58G82 188 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 FAM209AQ5JX71 171 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZNF362Q5T0B9 420 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 STEAP3Q658P3 488 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 FCRLBQ6BAA4 426 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PODNL1Q6PEZ8 512 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 CD200R1LQ6Q8B3 271 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 VITQ6UXI7 678 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 CASP12Q6UXS9 341 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 COMTD1Q86VU5 262 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SLC22A16Q86VW1 577 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PAQR7Q86WK9 346 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 RBM45Q8IUH3 476 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 SFTPA1Q8IWL2 248 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PM20D2Q8IYS1 436 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 AMER3Q8N944 861 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ACOT4Q8N9L9 421 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZNF485Q8NCK3 441 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 OR2L3Q8NG85 312 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 OR4K5Q8NGD3 323 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 OR6T1Q8NGN1 323 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 WDR36Q8NI36 951 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 TMEM163Q8TC26 289 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 GNPDA2Q8TDQ7 276 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 DIO2Q92813 273 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PMM1Q92871 262 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 FGF13Q92913 245 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 BADQ92934 168 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 KIAA1143Q96AT1 154 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 EXOSC8Q96B26 276 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 GIMAP5Q96F15 307 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 MAP6Q96JE9 813 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 C10orf90Q96M02 699 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 C12orf66Q96MD2 445 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZNF582Q96NG8 517 aaPredicted RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 PRAP1Q96NZ9 151 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 COQ7Q99807 217 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 GABRG3Q99928 467 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 WFDC6Q9BQY6 131 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 TSSK6Q9BXA6 273 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 C1QTNF7Q9BXJ2 289 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 OR2B2Q9GZK3 357 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ROGDIQ9GZN7 287 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SLC38A1Q9H2H9 487 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 MTIF3Q9H2K0 278 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 CNTD2Q9H8S5 307 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 AMBNQ9NP70 447 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SLC6A20Q9NP91 592 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 MRPS30Q9NP92 439 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 MBNL1Q9NR56 388 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 TM7SF3Q9NS93 570 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZCCHC3Q9NUD5 404 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 DCAF16Q9NXF7 216 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 OR6C2Q9NZP2 312 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SEC14L3Q9UDX4 400 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 KCNN3Q9UGI6 736 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 STUB1Q9UNE7 303 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SNX7Q9UNH6 387 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 EXOGQ9Y2C4 368 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 ZNF281Q9Y2X9 895 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 EXOSC1Q9Y3B2 195 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
SDC2-204ENST00000519914 GRIP1Q9Y3R0 1128 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 PCDHGB6Q9Y5F9 930 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 SNX8Q9Y5X2 465 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 STON1Q9Y6Q2 735 aa4.72□□□□□ -1.65
SDC2-204ENST00000519914 CACNA1IQ9P0X4 2223 aa4.71□□□□□ -1.65
SDC2-204ENST00000519914 A0A087WUU8 490 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms