RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TCHHL1Q5QJ38 904 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 CES3Q6UWW8 571 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 NUP54Q7Z3B4 507 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 PIWIL4Q7Z3Z4 852 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 TDRPQ86YL5 185 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 RIBC1Q8N443 379 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 ADCY4Q8NFM4 1077 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 OR2M3Q8NG83 312 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 OR52B6Q8NGF0 335 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 FAM110BQ8TC76 370 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 NEIL2Q969S2 332 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 GFM2Q969S9 779 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 OMA1Q96E52 524 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 SNF8Q96H20 258 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 VAT1Q99536 393 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 RAB1BQ9H0U4 201 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 TPK1Q9H3S4 243 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 DSN1Q9H410 356 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 HAUS4Q9H6D7 363 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 MARCH7Q9H992 704 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 ZBTB26Q9HCK0 441 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 PRDM7Q9NQW5 492 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 MMP26Q9NRE1 261 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 KLHL42Q9P2K6 505 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 FBXO9Q9UK97 447 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 VPS13DQ5THJ4 4388 aa5.78□□□□□ -1.48
CTNNA1-216ENST00000519489 A0A0J9YW62 118 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 C1orf226A1L170 272 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 SYCE3A1L190 88 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 F8W8V4 182 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 CDH16O75309 829 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 RP2O75695 350 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 RAD51DO75771 328 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 MYBL1P10243 752 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 S1PR1P21453 382 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 GPX3P22352 226 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 EEF1GP26641 437 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 SHC1P29353 583 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 MSX2P35548 267 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 CLCN7P51798 805 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 DSCR4P56555 118 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 GANABQ14697 944 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 ACAP2Q15057 778 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 RBBP5Q15291 538 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 ADPRMQ3LIE5 342 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 TSTD2Q5T7W7 516 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 UGT3A1Q6NUS8 523 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 CDK20Q8IZL9 346 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 LYG1Q8N1E2 194 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 C11orf44Q8N8P7 122 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 TRPV3Q8NET8 790 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 RNF128Q8TEB7 428 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 LPGAT1Q92604 370 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 TSNARE1Q96NA8 513 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 KLHDC3Q9BQ90 382 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 PCBD2Q9H0N5 130 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 GLRX2Q9NS18 164 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF275Q9NSD4 429 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 MED11Q9P086 117 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 PDE10AQ9Y233 779 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
CTNNA1-216ENST00000519489 C9JVG2 144 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 RTCAO00442 366 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 TNFSF11O14788 317 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 ADAMDEC1O15204 470 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CST8O60676 142 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 COX7A2P14406 83 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 ALOX15P16050 662 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 MAPK1P28482 360 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 GRIA1P42261 906 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CDKN2BP42772 138 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 OR3A2P47893 321 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 NR2C2P49116 596 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 TMED10P49755 219 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 RPS3AP61247 264 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 RPP38P78345 283 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CDH17Q12864 832 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 ADRM1Q16186 407 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 DEFB112Q30KQ8 113 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 TCP11X2Q5H9J9 407 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 AVPI1Q5T686 147 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF470Q6ECI4 717 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 Q6ZSV7 163 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 UBE2R2Q712K3 238 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 P2RY8Q86VZ1 359 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 WDFY1Q8IWB7 410 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CEP112Q8N8E3 955 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 BBOF1Q8ND07 529 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 TOR1AIP2Q8NFQ8 470 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CCDC34Q96HJ3 373 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 SRXN1Q9BYN0 137 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 PRDM13Q9H4Q3 707 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CXorf36Q9H7Y0 433 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 CA10Q9NS85 328 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 SIRT3Q9NTG7 399 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 KLHL13Q9P2N7 655 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 LIMA1Q9UHB6 759 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms