RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 TMEM27Q9HBJ8 222 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 Q9N2J8 555 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 HMG20AQ9NP66 347 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 AMBNQ9NP70 447 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 C2orf42Q9NWW7 574 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TVP23BQ9NYZ1 205 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 NLGN3Q9NZ94 848 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 OR10H1Q9Y4A9 318 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ABCA7Q8IZY2 2146 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 AGAP5A6NIR3 686 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 E9PQ18 207 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 BCAT2O15382 392 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 ZNF749O43361 778 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 BCAS1O75363 584 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 RAB36O95755 333 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 ADORA3P0DMS8 318 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 CDK4P11802 303 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 NID1P14543 1247 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 GNSP15586 552 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 NR4A1P22736 598 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 CSTF2P33240 577 aaKnown RBP eCLIP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 CXCL12P48061 93 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 ARRB1P49407 418 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 PGDP52209 483 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 LSM3P62310 102 aaKnown RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 BNIP3Q12983 259 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FAM53BQ14153 422 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 GAS6Q14393 721 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 KLHL22Q53GT1 634 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 MRPL2Q5T653 305 aaKnown RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FHL5Q5TD97 284 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 PLAG1Q6DJT9 500 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 LAIR1Q6GTX8 287 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 C1orf94Q6P1W5 598 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FIGNL1Q6PIW4 674 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 PLXDC1Q8IUK5 500 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 GPR135Q8IZ08 494 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 NLGN4XQ8N0W4 816 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 CARFQ8N187 725 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 METTL27Q8N6F8 245 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 C7orf57Q8NEG2 295 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FANK1Q8TC84 345 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 DOK4Q8TEW6 326 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 PIK3R3Q92569 461 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 DIO2Q92813 273 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 RFKQ969G6 155 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 TMEM80Q96HE8 168 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 G6PC3Q9BUM1 346 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 TSSK6Q9BXA6 273 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FOLH1BQ9HBA9 442 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FAM60AQ9NP50 221 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-204ENST00000517824 MAN2C1Q9NTJ4 1040 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 WDR70Q9NW82 654 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 FKBP14Q9NWM8 211 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 DLL3Q9NYJ7 618 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 REV1Q9UBZ9 1251 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 PRODH2Q9UF12 536 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 GMEB2Q9UKD1 530 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 SLC7A7Q9UM01 511 aa10.02□□□□□ -0.81
SPIDR-204ENST00000517824 CHD6Q8TD26 2715 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 PCDH15Q96QU1 1955 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 CEP295Q9C0D2 2601 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 LOC100506127A0A0U1RQW1 187 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 CLDN24A6NM45 220 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 CTNSO60931 367 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ENTPD6O75354 484 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 CDC123O75794 336 aaPredicted RBP10.01□□□□□ -0.81
SPIDR-204ENST00000517824 PIAS2O75928 621 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 OR2B3O76000 313 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 NADKO95544 446 aaPredicted RBP10.01□□□□□ -0.81
SPIDR-204ENST00000517824 GABRB1P18505 474 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 FPR3P25089 353 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 GPR4P46093 362 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 CSNK1EP49674 416 aaKnown RBP10.01□□□□□ -0.81
SPIDR-204ENST00000517824 GFERP55789 205 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 HSD17B7P56937 341 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ZNF91Q05481 1191 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 MAP4K2Q12851 820 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 BIKQ13323 160 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ZNF267Q14586 743 aaPredicted RBP10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ZNF846Q147U1 533 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 SPCS2Q15005 226 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 NCF4Q15080 339 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 OCLNQ16625 522 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 MOGQ16653 247 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ZNF528Q3MIS6 628 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 ARMCX4Q5H9R4 360 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 TMEM201Q5SNT2 666 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 SNAP47Q5SQN1 464 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 RPL13AP3Q6NVV1 102 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 SLC16A12Q6ZSM3 486 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 RASSF6Q6ZTQ3 369 aa10.01□□□□□ -0.81
SPIDR-204ENST00000517824 MBOAT2Q6ZWT7 520 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms