RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 VGLL4Q14135 290 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 KCTD2Q14681 263 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 BRD3Q15059 726 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 THEM4Q5T1C6 240 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZFP1Q6P2D0 407 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 TSSK4Q6SA08 328 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 NTM-AS1Q6ZSK4 140 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 OTOAQ7RTW8 1153 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRPF39Q86UA1 669 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 CCDC60Q8IWA6 550 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF679Q8IYX0 411 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR11H6Q8NGC7 330 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 DTX3LQ8TDB6 740 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 LPGAT1Q92604 370 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRCCQ92733 491 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 INTS12Q96CB8 462 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 NARS2Q96I59 477 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 CYP2S1Q96SQ9 504 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 GAD1Q99259 594 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEPT5Q99719 369 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 PDCD1LG2Q9BQ51 273 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 APOL6Q9BWW8 343 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 CXCL16Q9H2A7 254 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 RPP21Q9H633 154 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 RANGRFQ9HD47 186 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 TAS2R14Q9NYV8 317 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEPT10Q9P0V9 454 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 AMACRQ9UHK6 382 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 BARX2Q9UMQ3 279 aaPredicted RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 MRPS16Q9Y3D3 137 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 PCDHGB6Q9Y5F9 930 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 LRRFIP2Q9Y608 721 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 F8P00451 2351 aa-1.96□□□□□ -2.72
SNORA40.16-201ENST00000517238 IGHV1OR15-1A0A075B7D0 117 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 XPO1O14980 1071 aaKnown RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 OGG1O15527 345 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 FGF19O95750 216 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 RAB40ALP0C0E4 278 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 KDELR1P24390 212 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 IGFBP5P24593 272 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 OTX1P32242 354 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 UBE2E1P51965 193 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 PNLIPRP1P54315 467 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 F2RL1P55085 397 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CSNK1G2P78368 415 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 LOXL1Q08397 574 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 TMEM115Q12893 351 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 RALGDSQ12967 914 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRPF4BQ13523 1007 aaKnown RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 EXOSC7Q15024 291 aaKnown RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 KRT31Q15323 416 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 ADIPOQQ15848 244 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF791Q3KP31 576 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CFAP221Q4G0U5 840 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CTXN3Q4LDR2 81 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 UNC50Q53HI1 259 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 DHRS11Q6UWP2 260 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 TMPRSS11BQ86T26 416 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 TIGD4Q8IY51 512 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 RNF168Q8IYW5 571 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 TMTC2Q8N394 836 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 LFNGQ8NES3 379 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR10G9Q8NGN4 311 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR51F2Q8NH61 342 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 ACER1Q8TDN7 264 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 C20orf144Q9BQM9 153 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRAIPQ9BWF2 469 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRRG4Q9BZD6 226 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 DNTTIP1Q9H147 329 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CHODLQ9H9P2 273 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 PLGRKTQ9HBL7 147 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF226Q9NYT6 803 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CNOT8Q9UFF9 292 aaKnown RBP-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 CIDEBQ9UHD4 219 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 AP4B1Q9Y6B7 739 aa-1.97□□□□□ -2.72
SNORA40.16-201ENST00000517238 HUWE1Q7Z6Z7 4374 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 DOCK3Q8IZD9 2030 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CHD6Q8TD26 2715 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGHV3-66A0A0C4DH42 116 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 C15orf65H3BRN8 121 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 K7ERI5 159 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 UPK2O00526 184 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC7A4O43246 635 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 MED24O75448 989 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC25A12O75746 678 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CXCL14O95715 111 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CALCAP01258 141 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 MT-ND2P03891 347 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR2T7P0C7T2 308 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 F3P13726 295 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 VCLP18206 1134 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 CDX1P47902 265 aaPredicted RBP-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 ACOT2P49753 483 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 TFAP4Q01664 338 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 PUDPQ08623 228 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC17A1Q14916 467 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 RASA2Q15283 850 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 MEA1Q16626 185 aa-1.98□□□□□ -2.73
SNORA40.16-201ENST00000517238 NRF1Q16656 503 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms