RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 GMNCA6NCL1 334 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 HMGN4O00479 90 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 FCMRO60667 390 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 TRAPPC6AO75865 159 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 SOX30O94993 753 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 KRT75O95678 551 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 OXSR1O95747 527 aaPredicted RBP13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 GDF1P27539 372 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 KHKP50053 298 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 MVDP53602 400 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 FUT5Q11128 374 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 KLF10Q13118 480 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 HEPHL1Q6MZM0 1159 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 TRILQ7L0X0 811 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 SPATA21Q7Z572 469 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 RETREG3Q86VR2 466 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 PLCZ1Q86YW0 608 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 SPPL2CQ8IUH8 684 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 GHDCQ8N2G8 530 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 CHDHQ8NE62 594 aaPredicted RBP13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 DUSP19Q8WTR2 217 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 TBL1XR1Q9BZK7 514 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 NMUR2Q9GZQ4 415 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 SLC6A15Q9H2J7 730 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 UBQLN3Q9H347 655 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 FAM53CQ9NYF3 392 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 SLC25A37Q9NYZ2 338 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 B4GALT7Q9UBV7 327 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 ABCG2Q9UNQ0 655 aa13.3□□□□□ -0.28
SCARNA21-201ENST00000517026 CELSR2Q9HCU4 2923 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 GP1BBP13224 206 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ETFAP13804 333 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 TBXA2RP21731 343 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ELAVL4P26378 380 aaKnown RBP13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 TOMM20Q15388 145 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ARHGAP11BQ3KRB8 267 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 EIPR1Q53HC9 387 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ATAD3BQ5T9A4 648 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 C16orf62Q7Z3J2 963 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ANKFN1Q8N957 763 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 DSN1Q9H410 356 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 UBQLN4Q9NRR5 601 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 EXD2Q9NVH0 621 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 MED11Q9P086 117 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 ARMCX1Q9P291 453 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
SCARNA21-201ENST00000517026 CRYBG3Q68DQ2 2970 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 CLIC1O00299 241 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 GMFGO60234 142 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 SLC19A2O60779 497 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 IGHG3P01860 377 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 NGFRP08138 427 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 TCEA1P23193 301 aaKnown RBP13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 LCN1P31025 176 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 DCTP40126 519 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 CRATP43155 626 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 GPR68Q15743 365 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 SYPL1Q16563 259 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 OR4K17Q8NGC6 315 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 LDAHQ9H6V9 325 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 EXO5Q9H790 373 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 ACKR4Q9NPB9 350 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 QPCTLQ9NXS2 382 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 KCNE5Q9UJ90 142 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 SH3BGRL2Q9UJC5 107 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 MKLN1Q9UL63 735 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 POLEQ07864 2286 aa13.28□□□□□ -0.28
SCARNA21-201ENST00000517026 NINQ8N4C6 2090 aa13.27□□□□□ -0.28
SCARNA21-201ENST00000517026 ICE1Q9Y2F5 2266 aa13.27□□□□□ -0.28
SCARNA21-201ENST00000517026 TRBV5-3A0A0A0MS03 114 aa13.27□□□□□ -0.29
SCARNA21-201ENST00000517026 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.29
SCARNA21-201ENST00000517026 TRGV8A0A0C4DH27 118 aa13.27□□□□□ -0.29
SCARNA21-201ENST00000517026 CENPVL1A0A0U1RR11 272 aa13.27□□□□□ -0.29
SCARNA21-201ENST00000517026 A0A1B0GVC2 190 aa13.27□□□□□ -0.29
SCARNA21-201ENST00000517026 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms