RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 OR52P1PQ8NH57 321 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 HAS2Q92819 552 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 DLX4Q92988 240 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 UCN3Q969E3 161 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GLYATL1Q969I3 302 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 MRPL53Q96EL3 112 aaKnown RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RPGRIP1Q96KN7 1286 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GANQ9H2C0 597 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SIRT7Q9NRC8 400 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ARMCX3Q9UH62 379 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NUFIP1Q9UHK0 495 aaKnown RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 UBQLN1Q9UMX0 589 aaKnown RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 DHRS7Q9Y394 339 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NUP214P35658 2090 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 AHNAK2Q8IVF2 5795 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 MROH7-TTC4A0A0A0MT08 1334 aa0.61□□□□□ -2.31
RNU6-1338P-201ENST00000516328 LRIT2A6NDA9 550 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NPIPA2E9PIF3 369 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GFYI3L273 518 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 K7N7A8 449 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SLC30A4O14863 429 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 CFLARO15519 480 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 B4GALT5O43286 388 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 EIF5BO60841 1220 aaKnown RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SIX3O95343 332 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 CTDNEP1O95476 244 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 IGSF6O95976 241 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 CD55P08174 381 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GSTA1P08263 222 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 CISD3P0C7P0 127 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 CCNA2P20248 432 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 AQP1P29972 269 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GCKP35557 465 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 KIR2DS2P43631 304 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 STARP49675 285 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 STK19P49842 368 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 EXOSC7Q15024 291 aaKnown RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 DNLZQ5SXM8 178 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 COX15Q7KZN9 410 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 PEX5LQ8IYB4 626 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SIDT2Q8NBJ9 832 aaKnown RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 OR52I1Q8NGK6 324 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 FAM151AQ8WW52 585 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GIMAP1Q8WWP7 306 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 OR1E3Q8WZA6 343 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 TMEM80Q96HE8 168 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ACCSQ96QU6 501 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 HDHD3Q9BSH5 251 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 FEM1AQ9BSK4 669 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 DCDC2Q9UHG0 476 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GGA2Q9UJY4 613 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 WDR45Q9Y484 360 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NEUROG3Q9Y4Z2 214 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GRIN2DO15399 1336 aa0.6□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RPL36A-HNRNPH2H7BZ11 118 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 LAD1O00515 517 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 IFIT3O14879 490 aaKnown RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 FAM189A1O60320 539 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 HCN1O60741 890 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 IGFBP1P08833 259 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 C8orf89P0DMQ9 161 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 THRBP10828 461 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NPY1RP25929 384 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 FRKP42685 505 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 KCNJ1P48048 391 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SH3BGRP55822 239 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 PRPS1P60891 318 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RPS6P62753 249 aaKnown RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 NPRL3Q12980 569 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ARFRP1Q13795 201 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 TAF9Q16594 264 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 TEX44Q53QW1 395 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 SPIN3Q5JUX0 258 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RPUSD3Q6P087 351 aaKnown RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ZNF880Q6PDB4 577 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 TMEM26Q6ZUK4 368 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 C12orf56Q8IXR9 622 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 OR2T33Q8NG76 320 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ERO1AQ96HE7 468 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RAB3IPQ96QF0 476 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 RASL11BQ9BPW5 248 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ZNF430Q9H8G1 570 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 TMEM161AQ9NX61 479 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 VPS54Q9P1Q0 977 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 GIMAP2Q9UG22 337 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 MTRF1LQ9UGC7 380 aaKnown RBP0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 ITM2BQ9Y287 266 aa0.59□□□□□ -2.31
RNU6-1338P-201ENST00000516328 OR10H3O60404 316 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RAMP1O60894 148 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NME6O75414 186 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SLC4A1P02730 911 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CRISP2P16562 243 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 COL8A2P25067 703 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 GDI1P31150 447 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RPL4P36578 427 aaKnown RBP0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PTGDSP41222 190 aa0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DHPSP49366 369 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ZNF41P51814 821 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HERV-K104P63124 156 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms