RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	TRIM13	O60858	407 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ANGPTL1	O95841	491 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	DDX5	P17844	614 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	LCN1	P31025	176 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CCKAR	P32238	428 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	GABRA3	P34903	492 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CD79B	P40259	229 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ASMT	P46597	345 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CLDN15	P56746	228 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	RPS3A	P61247	264 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	GUSBP1	Q15486	140 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	GRAMD1B	Q3KR37	738 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF385B	Q569K4	471 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ANKRD26P1	Q6NSI1	321 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	VWA1	Q6PCB0	445 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514		Q6ZSR9	355 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	MARCH3	Q86UD3	253 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	C10orf107	Q8IVU9	208 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CEP70	Q8NHQ1	597 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	GPR151	Q8TDV0	419 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	DUSP19	Q8WTR2	217 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	FIG4	Q92562	907 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	STARD4	Q96DR4	205 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	MTERF3	Q96E29	417 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	TSSK3	Q96PN8	268 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	GATA5	Q9BWX5	397 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	C12orf65	Q9H3J6	166 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	TUBB1	Q9H4B7	451 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	DLL4	Q9NR61	685 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	STOML1	Q9UBI4	398 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	EIF3L	Q9Y262	564 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF337	Q9Y3M9	751 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	DNAJC15	Q9Y5T4	150 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ZFHX3	Q15911	3703 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	MED12L	Q86YW9	2145 aa		11.11	□□□□□ -0.63
CDK18-223	ENST00000515514	ABCA4	P78363	2273 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514		A0A087WZY1	265 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514		A0A1W2PPR1	153 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	C7orf72	A4D263	438 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514		H0YC42	278 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	CASK	O14936	926 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	NPHS1	O60500	1241 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	OXSR1	O95747	527 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	IGKV1D-16	P01601	117 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	CD8B	P10966	210 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	HPCAL1	P37235	193 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	KIR2DL2	P43627	348 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	SUCLG1	P53597	346 aa	Known RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	MANF	P55145	182 aa	Known RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	TPD52	P55327	224 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	CLDN20	P56880	219 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	ADAM8	P78325	824 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	PON3	Q15166	354 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	POU4F3	Q15319	338 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	RFTN2	Q52LD8	501 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	MFSD12	Q6NUT3	480 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	APOOL	Q6UXV4	268 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	SZRD1	Q7Z422	152 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	BTLA	Q7Z6A9	289 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	GGN	Q86UU5	652 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	MISP	Q8IVT2	679 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	NUP43	Q8NFH3	380 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	OR6Y1	Q8NGX8	325 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	FNDC9	Q8TBE3	224 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	TWIST2	Q8WVJ9	160 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	PIK3R3	Q92569	461 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	GIMAP5	Q96F15	307 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF845	Q96IR2	970 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	BEX4	Q9NWD9	120 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	ELOVL5	Q9NYP7	299 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF226	Q9NYT6	803 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	FIS1	Q9Y3D6	152 aa		11.1	□□□□□ -0.63
CDK18-223	ENST00000515514	FLNA	P21333	2647 aa	Known RBP	11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	TMEM114	B3SHH9	223 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	CTIF	O43310	598 aa	Known RBP	11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	AKAP10	O43572	662 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	NDUFB5	O43674	189 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	HSPA4L	O95757	839 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	CGA	P01215	116 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	LINC00032	P0C843	101 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	ACP2	P11117	423 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	POU2F1	P14859	743 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	FOSL1	P15407	271 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	CD53	P19397	219 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	MAPK1	P28482	360 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	UGT2B10	P36537	528 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	RPL3	P39023	403 aa	Known RBP	11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	SIRPA	P78324	504 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	FAM27E3	Q08E93	113 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	MLC1	Q15049	377 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	DUSP5	Q16690	384 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	XKR7	Q5GH72	579 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	ZCCHC12	Q6PEW1	402 aa		11.09	□□□□□ -0.63
CDK18-223	ENST00000515514	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms