RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 OR10G6Q8NH81 332 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 RIT1Q92963 219 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 AKAP7Q9P0M2 348 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 POM121CA8CG34 1229 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 CD79BP40259 229 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 HMGA2P52926 109 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 QSOX2Q6ZRP7 698 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 GPR135Q8IZ08 494 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 BABAM2Q9NXR7 383 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 IKZF2Q9UKS7 526 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SDK1Q7Z5N4 2213 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 A0A0A6YYJ9 748 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SLC5A10A0PJK1 596 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 K7ESM1 405 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 C6P13671 934 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 STXBP1P61764 594 aaKnown RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 POU6F2P78424 691 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 ODF4Q2M2E3 257 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 METAP1DQ6UB28 335 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 HTR3DQ70Z44 454 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 LRRC28Q86X40 367 aaPredicted RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 TCEAL8Q8IYN2 117 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 NXPE2Q96DL1 559 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 ARSGQ96EG1 525 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SIGLEC11Q96RL6 698 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 TMEM5Q9Y2B1 443 aa13.03□□□□□ -0.32
TSPAN17-208ENST00000514705 SNRPBP14678 240 aaKnown RBP13.02□□□□□ -0.32
TSPAN17-208ENST00000514705 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.328e-7■■■□□ 15.3
TSPAN17-208ENST00000514705 PKLRP30613 574 aa13.02□□□□□ -0.32
TSPAN17-208ENST00000514705 GBX2P52951 348 aaPredicted RBP13.02□□□□□ -0.32
TSPAN17-208ENST00000514705 SYT9Q86SS6 491 aa13.02□□□□□ -0.32
TSPAN17-208ENST00000514705 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.32
TSPAN17-208ENST00000514705 TMEM129A0AVI4 362 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 PPM1DO15297 605 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ALDOBP05062 364 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 RHOP08100 348 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 GKN3PP0CG01 181 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CFL1P23528 166 aaKnown RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 GID4Q8IVV7 300 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ELMOD3Q96FG2 381 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TRMT2BQ96GJ1 504 aaKnown RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 GLIPR2Q9H4G4 154 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 A8MVJ9 347 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 FMO6PO60774 539 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 BMP8BP34820 402 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CLDN20P56880 219 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TPBGQ13641 420 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 PGGHGQ32M88 737 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TP53I3Q53FA7 332 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 Q5BKY6 102 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CPA6Q8N4T0 437 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 SMAP2Q8WU79 429 aaPredicted RBP13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ZNF860A6NHJ4 632 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 DUXAA6NLW8 204 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 PSMD9O00233 223 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 FZD7O75084 574 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 RCBTB2O95199 551 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 TCRBP04435 133 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ZNF3P17036 446 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 SOX2P48431 317 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 STARP49675 285 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 CLDN2P57739 230 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 DEFA5Q01523 94 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ACSM3Q53FZ2 586 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ENTPD8Q5MY95 495 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 MPP7Q5T2T1 576 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 C12orf73Q69YU5 71 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 ESPNLQ6ZVH7 1005 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 NKAIN4Q8IVV8 208 aa13.02□□□□□ -0.33
TSPAN17-208ENST00000514705 GALNT6Q8NCL4 622 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms