RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 CSMD2Q7Z408 3487 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 SNUPNO95149 360 aaKnown RBP17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 OXSR1O95747 527 aaPredicted RBP17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 BMP5P22003 454 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 CCT3P49368 545 aaKnown RBP17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 LHX2P50458 406 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 DSCR4P56555 118 aaPredicted RBP17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 C21orf58P58505 322 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 HBA1P69905 142 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 CASP8Q14790 479 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 EXOSC6Q5RKV6 272 aaKnown RBP17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 RAET1LQ5VY80 246 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 NSUN5P2Q63ZY6 315 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 ACBD4Q8NC06 268 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 MEAF6Q9HAF1 191 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 NKIRAS1Q9NYS0 192 aa17.14■□□□□ 0.33
LPCAT1-206ENST00000514484 MPDZO75970 2070 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 HSPB2A8KAH6 182 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 FAM47E-STBD1D6RA91 191 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 ANGPTL1O95841 491 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 KITP10721 976 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 IGFBP2P18065 325 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 HK1P19367 917 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 CLK3P49761 638 aaKnown RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 RNF144AP50876 292 aaPredicted RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 AGFG1P52594 562 aaKnown RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 B3GALT5-AS1P59052 145 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 RPS26P62854 115 aaKnown RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 POU6F2P78424 691 aaPredicted RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 RCAN2Q14206 197 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 HSPB2Q16082 182 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 SMU1Q2TAY7 513 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 LSM12Q3MHD2 195 aaKnown RBP17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 CAMKMTQ7Z624 323 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 ANKRD46Q86W74 232 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 C9orf106Q8NAJ2 232 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 OR4C3Q8NH37 302 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 PSMA8Q8TAA3 256 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 SPOCK3Q9BQ16 436 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 G6PC3Q9BUM1 346 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 DPY30Q9C005 99 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 NEUROD4Q9HD90 331 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 SDHAF3Q9NRP4 125 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 GPATCH2Q9NW75 528 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 GIN1Q9NXP7 522 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 KCNE3Q9Y6H6 103 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 HEATR5AQ86XA9 2040 aa17.13■□□□□ 0.33
LPCAT1-206ENST00000514484 NPIPA5A0A0B4J1W7 369 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CD8B2A6NJW9 211 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SHISA8B8ZZ34 492 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 NPIPA7E9PJI5 369 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SDHDO14521 159 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SNNO75324 88 aaPredicted RBP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 ALDOCP09972 364 aaKnown RBP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 NPIPA8P0DM63 369 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CPN1P15169 458 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 LBPP18428 481 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CEACAM8P31997 349 aaPredicted RBP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 ZNF136P52737 540 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 NME5P56597 212 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CLDN18P56856 261 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SNTB1Q13884 538 aaKnown RBP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SLC25A35Q3KQZ1 300 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 CDC73Q6P1J9 531 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 AAGABQ6PD74 315 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 ZCCHC12Q6PEW1 402 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 UBQLNLQ8IYU4 475 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 FAM110BQ8TC76 370 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 SFXN5Q8TD22 340 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 ARL8AQ96BM9 186 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 C1GALT1C1Q96EU7 318 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 TREX2Q9BQ50 279 aaPredicted RBP17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 BTBD2Q9BX70 525 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 ACTRT3Q9BYD9 372 aa17.12■□□□□ 0.33
LPCAT1-206ENST00000514484 GOLGA8QA0A0J9YX86 632 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 GOLGA8OA6NCC3 632 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 MBD3L4A6NDZ8 208 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 MBD3L3A6NE82 208 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 MBD3L5A6NJ08 208 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 CLCA1A8K7I4 914 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 ALG1L2C9J202 215 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 C9JVG2 144 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 GOLGA8NF8WBI6 632 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 IL2RAP01589 272 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 ZNF708P17019 499 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 TIMP3P35625 211 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 ARSKQ6UWY0 536 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 KIRREL3Q8IZU9 778 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 NATD1Q8N6N6 113 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 OR5D16Q8NGK9 328 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 OR4A15Q8NGL6 344 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 MBD3L2Q8NHZ7 208 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 ZPLD1Q8TCW7 415 aa17.11■□□□□ 0.33
LPCAT1-206ENST00000514484 SH3YL1Q96HL8 342 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms