RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	THRSP	Q92748	146 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	LHX4	Q969G2	390 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	NSMCE2	Q96MF7	247 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	FAM213A	Q9BRX8	229 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TEX13A	Q9BXU3	409 aa	Predicted RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	RAB17	Q9H0T7	212 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	RIBC2	Q9H4K1	309 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TRIM10	Q9UDY6	481 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	KCNN3	Q9UGI6	736 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	PURG	Q9UJV8	347 aa	Known RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	DNPEP	Q9ULA0	475 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	SMC3	Q9UQE7	1217 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	ENTPD4	Q9Y227	616 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	MEGF6	O75095	1541 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	ARHGAP42	A6NI28	874 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	TMEM110-MUSTN1	A8MSY1	372 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	NPIPA2	E9PIF3	369 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	PANO1	I0J062	215 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	ANGPT2	O15123	496 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	EMC8	O43402	210 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	BUB1	O43683	1085 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	ZNF861P	O60384	105 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	RANBP6	O60518	1105 aa	Known RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SCGB2A1	O75556	95 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	KRTAP5-8	O75690	187 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	ADCY5	O95622	1261 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CCND2	P30279	289 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SOX6	P35712	828 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	DHPS	P49366	369 aa	Predicted RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	DIO3	P55073	304 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SRP54	P61011	504 aa	Known RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	PSG7	Q13046	419 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SPP2	Q13103	211 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CHIT1	Q13231	466 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SCGB2A2	Q13296	93 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CAMK4	Q16566	473 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	KYAT1	Q16773	422 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CCDC14	Q49A88	953 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	LCE1C	Q5T751	118 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	LCE1B	Q5T7P3	118 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	RIPPLY2	Q5TAB7	128 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CENPP	Q6IPU0	288 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	PRR5L	Q6MZQ0	368 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	SYVN1	Q86TM6	617 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	TMEM185A	Q8NFB2	350 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	OR4A16	Q8NH70	328 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	DLX4	Q92988	240 aa	Predicted RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CFAP53	Q96M91	514 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	CARD9	Q9H257	536 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	TMEM245	Q9H330	911 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	STARD5	Q9NSY2	213 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	ZCCHC3	Q9NUD5	404 aa	Known RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	COX16	Q9P0S2	106 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	LHX3	Q9UBR4	397 aa		2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	PTBP2	Q9UKA9	531 aa	Known RBP	2.69	□□□□□ -1.98
MATR3-223	ENST00000514402	UBE4B	O95155	1302 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	RAI1	Q7Z5J4	1906 aa	Predicted RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402		A0A1B0GWJ7	208 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402		F8WDY8	70 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	BOLA2-SMG1P6	H3BVE0	249 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	SGK1	O00141	431 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	WWP2	O00308	870 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	GMFG	O60234	142 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	ZNF17	P17021	662 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	UGT1A6	P19224	532 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	PSMA5	P28066	241 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	GDI1	P31150	447 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	HSPA1L	P34931	641 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	UGT1A3	P35503	534 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	NSF	P46459	744 aa	Known RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	HNRNPF	P52597	415 aa	Known RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	CCNA1	P78396	465 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	CCZ1B	P86790	482 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	CCZ1	P86791	482 aa	Predicted RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	BEX3	Q00994	111 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	IL9R	Q01113	521 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	GBE1	Q04446	702 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	EIF2B1	Q14232	305 aa	Known RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	ZNF658B	Q4V348	819 aa	Predicted RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	PRSS48	Q7RTY5	328 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	TAF8	Q7Z7C8	310 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	C9orf40	Q8IXQ3	194 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	FAM133A	Q8N9E0	248 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402		Q8N9L7	120 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	OR2T34	Q8NGX1	318 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	OR52J3	Q8NH60	311 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	BRSK1	Q8TDC3	778 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	TUBGCP3	Q96CW5	907 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	CCDC51	Q96ER9	411 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	C11orf24	Q96F05	449 aa	Predicted RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	ZNF184	Q99676	751 aa	Predicted RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	DDX47	Q9H0S4	455 aa	Known RBP	2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	ECT2	Q9H8V3	914 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	GORASP2	Q9H8Y8	452 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	TM9SF3	Q9HD45	589 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	KCNMB3	Q9NPA1	279 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	HPS4	Q9NQG7	708 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	NDUFA13	Q9P0J0	144 aa		2.68	□□□□□ -1.98
MATR3-223	ENST00000514402	SLC2A6	Q9UGQ3	507 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms