RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 BAK1Q16611 211 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 RPL13AP3Q6NVV1 102 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ABHD13Q7L211 337 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 RAB7BQ96AH8 199 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SAP130Q9H0E3 1048 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 CD207Q9UJ71 328 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 TRAPPC4Q9Y296 219 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 A0A1W2PP55 124 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GRXCR1A8MXD5 290 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GASTP01350 101 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 IFNA21P01568 189 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ADH7P40394 386 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 C3orf38Q5JPI3 329 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ZBTB37Q5TC79 503 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 NXNL2Q5VZ03 156 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 PLBD1Q6P4A8 553 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 RTL10Q7L3V2 364 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 RAB11FIP2Q7L804 512 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 OR2L3Q8NG85 312 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 OR9A1PQ8NGU1 263 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 OR5W2Q8NH69 310 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SUN3Q8TAQ9 357 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GRHL3Q8TE85 626 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 PKMYT1Q99640 499 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 CDCA4Q9BXL8 241 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SCN9AQ15858 1988 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ADAMTS4O75173 837 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 TP53P04637 393 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-211ENST00000513346 NUDT7P0C024 238 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 MTHFD2P13995 350 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 FOSL1P15407 271 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GRK5P34947 590 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ACTA2P62736 377 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ACTG2P63267 376 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 MRPS10P82664 201 aaKnown RBP10.62□□□□□ -0.71
TCOF1-211ENST00000513346 POU4F2Q12837 409 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM207Q6UWW9 146 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ADGRF3Q8IZF5 1079 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 OR6V1Q8N148 313 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GLYATL1Q969I3 302 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
TCOF1-211ENST00000513346 BOCQ9BWV1 1114 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SLC12A9Q9BXP2 914 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 BCL2L14Q9BZR8 327 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 WASH4PA8MWX3 477 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 K7ERQ8 282 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 EIF1AYO14602 144 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TXNL1O43396 289 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 RENP00797 406 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CSF3P09919 207 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 UBBP0CG47 229 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 UBCP0CG48 685 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PET100P0DJ07 73 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PSMB1P20618 241 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SLC19A1P41440 591 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CBX5P45973 191 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 EIF1AXP47813 144 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 RPS27AP62979 156 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 UBA52P62987 128 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 NKX3-2P78367 333 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MGAT3Q09327 533 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 LEXMQ3ZCV2 418 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ALKBH2Q6NS38 261 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PGAP1Q75T13 922 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM179BQ7Z7N9 219 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TPRA1Q86W33 373 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CPOQ8IVL8 374 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MCEMP1Q8IX19 187 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ECHDC3Q96DC8 303 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CPNE2Q96FN4 548 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 NIPSNAP1Q9BPW8 284 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SRRQ9GZT4 340 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 NARFLQ9H6Q4 476 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 DIMT1Q9UNQ2 313 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 WDR45Q9Y484 360 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SNX11Q9Y5W9 270 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 J3KTA2 159 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SULT1C2O00338 296 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 FZD7O75084 574 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 SPARCP09486 303 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 CERS1P27544 350 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF140P52738 457 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 KIAA1024LP59773 190 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 NTHL1P78549 312 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TEKQ02763 1124 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PAQR9Q6ZVX9 377 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 DEFB119Q8N690 84 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 BOLLQ8N9W6 283 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 OR7G2Q8NG99 324 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 LMX1AQ8TE12 382 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 FAM46AQ96IP4 442 aaKnown RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 TAPBPLQ9BX59 468 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 C8orf33Q9H7E9 229 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-211ENST00000513346 PLAC1Q9HBJ0 212 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 MUTYHQ9UIF7 546 aa10.61□□□□□ -0.71
TCOF1-211ENST00000513346 GABRR3A8MPY1 467 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms