RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 IGKV1D-16P01601 117 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 P04436 131 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 BCHEP06276 602 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 NGFRP08138 427 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 CCL3P10147 92 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 NR2F1P10589 423 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 CYP4B1P13584 511 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 NME2P22392 152 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC7A2P52569 658 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 RBBP4Q09028 425 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 FUT5Q11128 374 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 LY6DQ14210 128 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SELPLGQ14242 412 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF169Q14929 603 aaPredicted RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 INAQ16352 499 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF630Q2M218 657 aaPredicted RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 FLYWCH1Q4VC44 716 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 GPAT3Q53EU6 434 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF766Q5HY98 468 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 RABL3Q5HYI8 236 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 CCNJQ5T5M9 372 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PRAMEF20Q5VT98 475 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PRAMEF8Q5VWM4 474 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PRAMEF7Q5VXH5 474 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC6A19Q695T7 634 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SPINK14Q6IE38 97 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PCSK4Q6UW60 755 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 C16orf89Q6UX73 402 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 FRRS1Q6ZNA5 592 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 LRRC74BQ6ZQY2 392 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 MDGA2Q7Z553 956 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 NET1Q7Z628 596 aaPredicted RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SERPINA11Q86U17 422 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF227Q86WZ6 799 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC30A8Q8IWU4 369 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF619Q8N2I2 560 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 C10orf111Q8N326 155 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 FBXW8Q8N3Y1 598 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 METTL25Q8N6Q8 603 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 EXD3Q8N9H8 876 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF527Q8NB42 609 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 FAM98AQ8NCA5 519 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 LSM14AQ8ND56 463 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 OR5M3Q8NGP4 307 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 OR10A6Q8NH74 314 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SPPL2AQ8TCT8 520 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 RNF138Q8WVD3 245 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 OIT3Q8WWZ8 545 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PNPLA2Q96AD5 504 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SCMH1Q96GD3 660 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 TRNT1Q96Q11 434 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ECSITQ9BQ95 431 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 OSBPL11Q9BXB4 747 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 TRIM8Q9BZR9 551 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SAP130Q9H0E3 1048 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 METTL7AQ9H8H3 244 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SH2D2AQ9NP31 389 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 SPAG4Q9NPE6 437 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF71Q9NQZ8 489 aaPredicted RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ABCD2Q9UBJ2 740 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ABCG2Q9UNQ0 655 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 B3GNT3Q9Y2A9 372 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 L3MBTL1Q9Y468 752 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 WDR45Q9Y484 360 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 CSAG2Q9Y5P2 127 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PHF3Q92576 2039 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 A0A1W2PQD3 144 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 PRAMEF27A3QJZ7 478 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC35F4A4IF30 521 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 A6NJY4 79 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 FAM220BPB1ANY3 271 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 B2RBV5 119 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ALG1L2C9J202 215 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 C5orf58C9J3I9 102 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 KLRC4-KLRK1H3BQV0 150 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 NME4O00746 187 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SCDO00767 359 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC28A2O43868 658 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HNRNPCL1O60812 293 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 DNAJA2O60884 412 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ICOSLGO75144 302 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 UTS2O95399 124 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 H6PDO95479 791 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 OXSR1O95747 527 aaPredicted RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SP1P08047 785 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CHRM4P08173 479 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TFPTP0C1Z6 253 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 T-ENOLP0DO92 83 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HPGDP15428 266 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TBXA2RP21731 343 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 EVI2BP34910 448 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 DCTP40126 519 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CASP3P42574 277 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CLK3P49761 638 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ATP12AP54707 1039 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 EEFSECP57772 596 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 PSME3P61289 254 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 KLRB1Q12918 225 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SNTA1Q13424 505 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SCARB2Q14108 478 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms