RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 VPS26BQ4G0F5 336 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 LIPMQ5VYY2 423 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CLEC6AQ6EIG7 209 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF474Q6S9Z5 364 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 EIF1ADQ8N9N8 165 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 ZFP28Q8NHY6 868 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 ZBED6CLQ96FA7 236 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 WFIKKN1Q96NZ8 548 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CCT7Q99832 543 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 MED18Q9BUE0 208 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 OPN3Q9H1Y3 402 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 GSX1Q9H4S2 264 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 LRTM1Q9HBL6 345 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 KLHL28Q9NXS3 571 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 C6orf203Q9P0P8 240 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 STOML1Q9UBI4 398 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 PTGDR2Q9Y5Y4 395 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 GXYLT2A0PJZ3 443 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 DEFB108AA8MXU0 73 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 COPEO14579 308 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 TBX19O60806 448 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 NKX2-2O95096 273 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CGAP01215 116 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 IGKV1D-16P01601 117 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 SHBGP04278 402 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 NEFHP12036 1026 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 POU2F1P14859 743 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF17P17021 662 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 SDC1P18827 310 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CRYGSP22914 178 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 UGT2B10P36537 528 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 MAP3K8P41279 467 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 KCNJ5P48544 419 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 GUSBP1Q15486 140 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 TMEM44Q2T9K0 475 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 GRAMD1BQ3KR37 738 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 SHEQ5VZ18 495 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 ANKRD26P1Q6NSI1 321 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 APOOLQ6UXV4 268 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 RNF165Q6ZSG1 346 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 BIVMQ86UB2 503 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CXorf67Q86X51 503 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 KRTAP1-3Q8IUG1 177 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CDRT4Q8N9R6 151 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CEP70Q8NHQ1 597 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 GPR151Q8TDV0 419 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 UBLCP1Q8WVY7 318 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 PIK3R3Q92569 461 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 CIDECQ96AQ7 238 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 PPCDCQ96CD2 204 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 FCRL1Q96LA6 429 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 MS4A4EQ96PG1 132 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 TRMOQ9BU70 441 aa13.23□□□□□ -0.29
CCHCR1-229ENST00000512418 PCNX3Q9H6A9 2034 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 C16orf97H3BN30 126 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 AZIN1O14977 448 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 SIAH2O43255 324 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 CHEK2O96017 543 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 NGFRP08138 427 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 KRT4P19013 534 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 PRKAG1P54619 331 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 MANFP55145 182 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 PDE7AQ13946 482 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 SGCBQ16585 318 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 Q6ZSR9 355 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 FAM214BQ7L5A3 538 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 SZRD1Q7Z422 152 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 GGNQ86UU5 652 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 OR2T11Q8NH01 316 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 C18orf12Q96KH6 178 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 TSSK3Q96PN8 268 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 PIP5K1AQ99755 562 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 REEP4Q9H6H4 257 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 ACSS1Q9NUB1 689 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 SH3BP4Q9P0V3 963 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 NTMQ9P121 344 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 PROCRQ9UNN8 238 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 VDAC3Q9Y277 283 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 NAV3Q8IVL0 2385 aa13.22□□□□□ -0.29
CCHCR1-229ENST00000512418 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 A0A087WZY1 265 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 SHISA8B8ZZ34 492 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 EIF1AYO14602 144 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 NDUFB5O43674 189 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 GMFGO60234 142 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 AQP8O94778 261 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 OXSR1O95747 527 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 EIF1AXP47813 144 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms