RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 PDIK1LQ8N165 341 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 TCAIMQ8N3R3 496 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 BBOF1Q8ND07 529 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 NUDT10Q8NFP7 164 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 OR10G3Q8NGC4 313 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 NEIL3Q8TAT5 605 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 ACTRT1Q8TDG2 376 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 ZNF473Q8WTR7 871 aaKnown RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 GTF3AQ92664 365 aaKnown RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 ESAMQ96AP7 390 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 PPWD1Q96BP3 646 aaKnown RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 CFAP36Q96G28 342 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 NUDT11Q96G61 164 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 ZC3HAV1LQ96H79 300 aaKnown RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 VPS39Q96JC1 886 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 JSRP1Q96MG2 331 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 RUNDC3BQ96NL0 473 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 DGAT2Q96PD7 388 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 TIMP4Q99727 224 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 CITED1Q99966 193 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 TMEM79Q9BSE2 394 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 EFCAB11Q9BUY7 163 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 MS4A8Q9BY19 250 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 DERL2Q9GZP9 239 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 CNOT10Q9H9A5 744 aaKnown RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 POPDC3Q9HBV1 291 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 DNAJC11Q9NVH1 559 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 MOCS1Q9NZB8 636 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 ASIC3Q9UHC3 531 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 CHMP2BQ9UQN3 213 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 PPP2R2CQ9Y2T4 447 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 CHCHD2Q9Y6H1 151 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-207ENST00000511092 TEX264Q9Y6I9 313 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 IKBKGQ9Y6K9 419 aa5.42□□□□□ -1.54
CLCN3-207ENST00000511092 C15orf38-AP3S2A0A0A6YYH1 394 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 GOLGA6L10A0A0M3HER8 536 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 IQANK1A0A1B0GTG1 560 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 RTCAO00442 366 aaKnown RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 SH3BGRLO75368 114 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 TRAPPC6AO75865 159 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 ACSL3O95573 720 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 HPNP05981 417 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 EPORP19235 508 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 HIST1H1TP22492 207 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 GDF1P27539 372 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 OPRM1P35372 400 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 CASP2P42575 452 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 MSH2P43246 934 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 HSPA7P48741 367 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 TRPC1P48995 793 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 IRF8Q02556 426 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 CRYZQ08257 329 aaKnown RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 MGAT5Q09328 741 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 CHIT1Q13231 466 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 SLAMF1Q13291 335 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 E2F2Q14209 437 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 MORF4L2Q15014 288 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 NTRK2Q16620 822 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 PDK4Q16654 411 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 ACSF3Q4G176 576 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 TMEM35AQ53FP2 167 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 FBXO48Q5FWF7 155 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 NSUN5P2Q63ZY6 315 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 OR4C11Q6IEV9 310 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 ZNF550Q7Z398 422 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 GPSM1Q86YR5 675 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 LACC1Q8IV20 430 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 LRRC8AQ8IWT6 810 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 ZNF441Q8N8Z8 693 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 DOK4Q8TEW6 326 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 TANKQ92844 425 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 UBE2E3Q969T4 207 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 LRRC39Q96DD0 335 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 FBXL20Q96IG2 436 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 GAL3ST4Q96RP7 486 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 OSBPL9Q96SU4 736 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 KRT12Q99456 494 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 SLC6A7Q99884 636 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 DOHHQ9BU89 302 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 WWTR1Q9GZV5 400 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 UBQLN3Q9H347 655 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 RHOJQ9H4E5 214 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 RPF2Q9H7B2 306 aaKnown RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 MS4A12Q9NXJ0 267 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 WWOXQ9NZC7 414 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 PTBP2Q9UKA9 531 aaKnown RBP5.41□□□□□ -1.54
CLCN3-207ENST00000511092 ATP23Q9Y6H3 246 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 MUC2Q02817 5179 aa5.41□□□□□ -1.54
CLCN3-207ENST00000511092 IGHV4-61A0A0C4DH41 118 aa5.4□□□□□ -1.54
CLCN3-207ENST00000511092 CD8B2A6NJW9 211 aa5.4□□□□□ -1.54
CLCN3-207ENST00000511092 SAP18O00422 153 aaKnown RBP5.4□□□□□ -1.54
CLCN3-207ENST00000511092 TP53I11O14683 189 aa5.4□□□□□ -1.54
CLCN3-207ENST00000511092 TP73O15350 636 aa5.4□□□□□ -1.54
CLCN3-207ENST00000511092 CCNT2O60583 730 aaKnown RBP5.4□□□□□ -1.54
CLCN3-207ENST00000511092 SNX4O95219 450 aa5.4□□□□□ -1.54
CLCN3-207ENST00000511092 LRATO95237 230 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms