RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 A0A1W2PRB8 838 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 HCRTR2O43614 444 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 LYPLA1O75608 230 aaPredicted RBP20.77■□□□□ 0.92
SNF8-209ENST00000510558 HSPA4LO95757 839 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 ANGPTL1O95841 491 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 LAMP1P11279 417 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 PEPDP12955 493 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 POU3F2P20265 443 aaPredicted RBP20.77■□□□□ 0.92
SNF8-209ENST00000510558 C17orf67Q0P5P2 114 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 FLYWCH1Q4VC44 716 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 ZCCHC12Q6PEW1 402 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 GRAMD2AQ8IUY3 354 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 UBQLNLQ8IYU4 475 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 INTS12Q96CB8 462 aaKnown RBP20.77■□□□□ 0.92
SNF8-209ENST00000510558 TUBGCP3Q96CW5 907 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 FAM120BQ96EK7 910 aaKnown RBP20.77■□□□□ 0.92
SNF8-209ENST00000510558 C16orf58Q96GQ5 468 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 YIPF4Q9BSR8 244 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 SFXN3Q9BWM7 321 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 ZCCHC3Q9NUD5 404 aaKnown RBP20.77■□□□□ 0.92
SNF8-209ENST00000510558 JKAMPQ9P055 326 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 RAB21Q9UL25 225 aa20.77■□□□□ 0.92
SNF8-209ENST00000510558 IGLV3-32A0A0A0MS00 114 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 WDR91A4D1P6 747 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 ITM2AO43736 263 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 KCNK2O95069 426 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 SERPINE1P05121 402 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 ALOX5P09917 674 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 PRIM2P49643 509 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 CHI3L2Q15782 390 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNF8-209ENST00000510558 EXOSC6Q5RKV6 272 aaKnown RBP20.76■□□□□ 0.91
SNF8-209ENST00000510558 CPTPQ5TA50 214 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 FIGNL1Q6PIW4 674 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 GCNT2Q8N0V5 402 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 COX18Q8N8Q8 333 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 FAM110BQ8TC76 370 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 JADE3Q92613 823 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 OTUB1Q96FW1 271 aaPredicted RBP20.76■□□□□ 0.91
SNF8-209ENST00000510558 ACBD3Q9H3P7 528 aa20.76■□□□□ 0.91
SNF8-209ENST00000510558 SSU72Q9NP77 194 aaKnown RBP20.76■□□□□ 0.91
SNF8-209ENST00000510558 OR2M5A3KFT3 312 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 ALG1L2C9J202 215 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 CTAG2O75638 210 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 OXSR1O95747 527 aaPredicted RBP20.75■□□□□ 0.91
SNF8-209ENST00000510558 LASP1Q14847 261 aaKnown RBP20.75■□□□□ 0.91
SNF8-209ENST00000510558 CHMP1BQ7LBR1 199 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 ZAR1Q86SH2 424 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 KIF18BQ86Y91 864 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 MEIOBQ8N635 442 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 KRTCAP2Q8N6L1 136 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 OR5M1Q8NGP8 315 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 OR4C3Q8NH37 302 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 GOT1L1Q8NHS2 421 aaPredicted RBP20.75■□□□□ 0.91
SNF8-209ENST00000510558 FAM222BQ8WU58 562 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 NUDT8Q8WV74 236 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 OR5P2Q8WZ92 322 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 PIGQQ9BRB3 760 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 ZNF395Q9H8N7 513 aaPredicted RBP20.75■□□□□ 0.91
SNF8-209ENST00000510558 ATAD3AQ9NVI7 634 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 DNAJB12Q9NXW2 375 aaKnown RBP20.75■□□□□ 0.91
SNF8-209ENST00000510558 ZNF337Q9Y3M9 751 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 SNX8Q9Y5X2 465 aa20.75■□□□□ 0.91
SNF8-209ENST00000510558 LINC01387J3KSC0 135 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 TM9SF1O15321 606 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 BIRC5O15392 142 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 GMFGO60234 142 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 TGM6O95932 706 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 HMGN2P05204 90 aaKnown RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 NGFRP08138 427 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 PRPS1L1P21108 318 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 DIO3P55073 304 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 PDCD2Q16342 344 aaPredicted RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 GLYR1Q49A26 553 aaPredicted RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 P4HA3Q7Z4N8 544 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 NATD1Q8N6N6 113 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 ZNF781Q8N8C0 355 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 PSMA8Q8TAA3 256 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 COQ8BQ96D53 544 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 PRPF18Q99633 342 aaKnown RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 GPATCH1Q9BRR8 931 aaKnown RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 CENPHQ9H3R5 247 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 FBXO34Q9NWN3 711 aa20.74■□□□□ 0.91
SNF8-209ENST00000510558 EIF3LQ9Y262 564 aaKnown RBP20.74■□□□□ 0.91
SNF8-209ENST00000510558 H3BML4 177 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 NDUFB5O43674 189 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 C6orf47O95873 294 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 DHRS4L1P0CG22 281 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 TBXA2RP21731 343 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 LCN1P31025 176 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 CLDN15P56746 228 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 ABCE1P61221 599 aaKnown RBP20.73■□□□□ 0.91
SNF8-209ENST00000510558 POU6F2P78424 691 aaPredicted RBP20.73■□□□□ 0.91
SNF8-209ENST00000510558 SORDQ00796 357 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 MAD2L1Q13257 205 aaPredicted RBP20.73■□□□□ 0.91
SNF8-209ENST00000510558 CEP85LQ5SZL2 805 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 CCNJQ5T5M9 372 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 LUZP2Q86TE4 346 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 RIMKLAQ8IXN7 391 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 GATSQ8NAP1 163 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms