RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 LRRC24Q50LG9 513 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 KIAA1755Q5JYT7 1200 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MFSD14BQ5SR56 506 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TTC23Q5W5X9 447 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 KRT39Q6A163 491 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DGAT2L7PQ6IED9 249 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 APOBEC3HQ6NTF7 200 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 REEP3Q6NUK4 255 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ACSM5Q6NUN0 579 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 C11orf63Q6NUN7 778 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 FAHD2BQ6P2I3 314 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DLEU7Q6UYE1 221 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM182Q6ZP80 229 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CFAP77Q6ZQR2 320 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ASB18Q6ZVZ8 466 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MRPL21Q7Z2W9 205 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF546Q86UE3 836 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ZZZ3Q8IYH5 903 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 HS3ST5Q8IZT8 346 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ZFP82Q8N141 532 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TEX26Q8N6G2 289 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 BCORP1Q8N888 145 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OR4C5Q8NGB2 326 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 STOML3Q8TAV4 291 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF398Q8TD17 642 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 RNF133Q8WVZ7 376 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ASB10Q8WXI3 467 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SMPDL3BQ92485 455 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ATOH1Q92858 354 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OSTF1Q92882 214 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DAZLQ92904 295 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SMARCD2Q92925 531 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ERGIC1Q969X5 290 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ULK4Q96C45 1275 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 KLHL29Q96CT2 875 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 FAHD2AQ96GK7 314 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SENP5Q96HI0 755 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SLC45A3Q96JT2 553 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SERPINB11Q96P15 392 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PANX3Q96QZ0 392 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OR5M11Q96RB7 305 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DCLRE1CQ96SD1 692 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 RNF2Q99496 336 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MAP3K3Q99759 626 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 EGFL8Q99944 293 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ADAM2Q99965 735 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TCEAL7Q9BRU2 100 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MRI1Q9BV20 369 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PTDSS2Q9BVG9 487 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TSSK1BQ9BXA7 367 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 STRADBQ9C0K7 418 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TRABDQ9H4I3 376 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 KLHL31Q9H511 634 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 WDR76Q9H967 626 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 IL1RAPQ9NPH3 570 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 IMPAD1Q9NX62 359 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 USE1Q9NZ43 259 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 EPHA6Q9UF33 1036 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MSRAQ9UJ68 235 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 POU2F3Q9UKI9 436 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OR52A1Q9UKL2 312 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 FBXL3Q9UKT7 428 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CA5BQ9Y2D0 317 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ALG5Q9Y673 324 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OVOS2A0A0J9YW53 1432 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 OVOS2Q6IE36 1432 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TEX13DA0A0J9YY54 714 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 UBA6A0AVT1 1052 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 FAM25AB3EWG3 89 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 FAM25CB3EWG5 89 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 FAM25GB3EWG6 89 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 C9JVG2 144 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 H3BMM5 538 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 H3BN98 237 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 K7EP13 123 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 M0QZ92 97 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 CDC7O00311 574 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 KPNA3O00505 521 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 FADS1O60427 444 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 UGT1A9O60656 530 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 HUS1O60921 280 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 AVILO75366 819 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 POP7O75817 140 aaKnown RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 ZMPSTE24O75844 475 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 SRP72O76094 671 aaKnown RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 SOX30O94993 753 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 ACSL3O95573 720 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 CST4P01036 141 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 PCCAP05165 728 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 LPLP06858 475 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 HOXD4P09016 255 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 EBLN1P0CF75 366 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 UBCP0CG48 685 aaKnown RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 RD3LP0DJH9 198 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 GSPT1P15170 499 aaKnown RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 KCNE1P15382 129 aa4.19□□□□□ -1.74
NIPBL-206ENST00000509429 OGNP20774 298 aaKnown RBP4.19□□□□□ -1.74
NIPBL-206ENST00000509429 MT3P25713 68 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms