RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 NKX2-2O95096 273 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 ATE1O95260 518 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 ANGPTL1O95841 491 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 TGM6O95932 706 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 HRGP04196 525 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 KRT16P08779 473 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 CD8BP10966 210 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 CPOXP36551 454 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 HPCAL1P37235 193 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 CD79BP40259 229 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PRIM2P49643 509 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 MLC1Q15049 377 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 SGCBQ16585 318 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PDSS1Q5T2R2 415 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 WDR75Q8IWA0 830 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 METTL25Q8N6Q8 603 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 NUP43Q8NFH3 380 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 CAVIN3Q969G5 261 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PGM2Q96G03 612 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF845Q96IR2 970 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PPP3R2Q96LZ3 170 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PRPF18Q99633 342 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 RNF122Q9H9V4 155 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 UBQLN4Q9NRR5 601 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 ATAD3AQ9NVI7 634 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 SH3BP4Q9P0V3 963 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 EMC9Q9Y3B6 208 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 HRNRQ86YZ3 2850 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 C7orf72A4D263 438 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 H3BML4 177 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 SCDO00767 359 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 NME6O75414 186 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 SHBGP04278 402 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ALOX5P09917 674 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 POU2F1P14859 743 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PPP3CBP16298 524 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 SDC1P18827 310 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 FPR1P21462 350 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 TBXA2RP21731 343 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ME2P23368 584 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 MAP3K8P41279 467 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 RFX3P48380 749 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 STX5Q13190 355 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PDE7AQ13946 482 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 SHEQ5VZ18 495 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 CLEC6AQ6EIG7 209 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 MARCH3Q86UD3 253 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 C10orf107Q8IVU9 208 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF527Q8NB42 609 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 SLC9A6Q92581 669 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PIGTQ969N2 578 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 APOPT1Q96IL0 206 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 FAM111AQ96PZ2 611 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PINK1Q9BXM7 581 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PRRG4Q9BZD6 226 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 HOXD1Q9GZZ0 328 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 LIME1Q9H400 295 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 EQTNQ9NQ60 294 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 MCTS1Q9ULC4 181 aaKnown RBP12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
CCHCR1-227ENST00000508852 ZFHX3Q15911 3703 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 A0A1W2PQD3 144 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 SMIM23A6NLE4 172 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 C16orf97H3BN30 126 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 SEC14L5O43304 696 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 PABPC4LP0CB38 370 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 KIR2DL2P43627 348 aaPredicted RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 KCNJ5P48544 419 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 PRKAG1P54619 331 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 RPL38P63173 70 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 PCLAFQ15004 111 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 PON3Q15166 354 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 TMEM44Q2T9K0 475 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 GRAMD1BQ3KR37 738 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 LSM12Q3MHD2 195 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 Q6ZSR9 355 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 FAM214BQ7L5A3 538 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 MTERF4Q7Z6M4 381 aaKnown RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 DDIASQ8IXT1 998 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 GTPBP8Q8N3Z3 284 aaPredicted RBP12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 FAM110BQ8TC76 370 aa12.25□□□□□ -0.45
CCHCR1-227ENST00000508852 EPS8L3Q8TE67 593 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms