RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GNB5O14775 395 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 BCKDKO14874 412 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SCO2O43819 266 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SNX3O60493 162 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SLC19A2O60779 497 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 TRAPPC6AO75865 159 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 DCTN3O75935 186 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 UNC5CO95185 931 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CBX6O95503 412 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 OXSR1O95747 527 aaPredicted RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 IGHG3P01860 377 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 GSNP06396 782 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 NR2F1P10589 423 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CAPN3P20807 821 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 MST1P26927 711 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 DCTP40126 519 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 RFC3P40938 356 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CDKN2CP42773 168 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 MAGEA5P43359 124 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CRISP3P54108 245 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ATP12AP54707 1039 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SUMO3P55854 103 aaPredicted RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 PER3P56645 1201 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 DSTNP60981 165 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 KCNC4Q03721 635 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 NFYCQ13952 458 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CYLC2Q14093 348 aaPredicted RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.07
NUP54-207ENST00000508583 ZSWIM7Q19AV6 140 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ZNF630Q2M218 657 aaPredicted RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 GRAMD1BQ3KR37 738 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 GPAT3Q53EU6 434 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 BICRALQ6AI39 1079 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 HEPHL1Q6MZM0 1159 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 MTFR2Q6P444 385 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SLC2A7Q6PXP3 512 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 DPP10Q8N608 796 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 METTL25Q8N6Q8 603 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ZFP90Q8TF47 636 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SARAFQ96BY9 339 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 SDF2Q99470 211 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ZNF350Q9GZX5 532 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 PAIP1Q9H074 479 aaKnown RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 ARMC7Q9H6L4 198 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 PROK2Q9HC23 129 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 GID8Q9NWU2 228 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 STOML1Q9UBI4 398 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 DKKL1Q9UK85 242 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 AP3M1Q9Y2T2 418 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ARL2BPQ9Y2Y0 163 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 MRPS18CQ9Y3D5 142 aaKnown RBP8.35□□□□□ -1.07
NUP54-207ENST00000508583 WDR45Q9Y484 360 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 POLEQ07864 2286 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 A0A087WZY1 265 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 IGLV3-32A0A0A0MS00 114 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 C15orf38-AP3S2A0A0A6YYH1 394 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 TRGV5A0A0B4J1U4 118 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 A0A1B0GVC2 190 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 PINLYPA6NC86 204 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 C5orf58C9J3I9 102 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 GTPBP1O00178 669 aaKnown RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 HMGN4O00479 90 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 AQP7O14520 342 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 KIAA0513O60268 411 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 FADS1O60427 444 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 ANGPTL1O95841 491 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 IGKV1D-16P01601 117 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 HPNP05981 417 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 DRD4P21917 467 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 PTPN6P29350 595 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 SRD5A2P31213 254 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 PTGS2P35354 604 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 PTGDSP41222 190 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 SEC24CP53992 1094 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 DSCR4P56555 118 aaPredicted RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 KLF10Q13118 480 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 UBAP2LQ14157 1087 aaKnown RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 RGNQ15493 299 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 GPR68Q15743 365 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 IGFBP7Q16270 282 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 TRMT5Q32P41 509 aaKnown RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 CMPK2Q5EBM0 449 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUP54-207ENST00000508583 CCNJQ5T5M9 372 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 GKAP1Q5VSY0 366 aaPredicted RBP8.34□□□□□ -1.07
NUP54-207ENST00000508583 PRAMEF8Q5VWM4 474 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 PRAMEF7Q5VXH5 474 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 AAGABQ6PD74 315 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 LRRC74BQ6ZQY2 392 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 TRILQ7L0X0 811 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 ARPINQ7Z6K5 226 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 DHDDSQ86SQ9 333 aa8.34□□□□□ -1.07
NUP54-207ENST00000508583 IFNEQ86WN2 208 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms