RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 RPS4Y1P22090 263 aaKnown RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 CASP3P42574 277 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 CPA2P48052 419 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 RFX3P48380 749 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 CD97P48960 835 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 RASSF2P50749 326 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 SLC7A2P52569 658 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 ATP12AP54707 1039 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 EEFSECP57772 596 aaKnown RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 PSME3P61289 254 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 KCNJ2P63252 427 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 CBX1P83916 185 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 CDK6Q00534 326 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 SCARB2Q14108 478 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 VEZF1Q14119 521 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 ZNF141Q15928 474 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 DNAL1Q4LDG9 190 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 RABL3Q5HYI8 236 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 CCNJQ5T5M9 372 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 REEP3Q6NUK4 255 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 PCSK4Q6UW60 755 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 FRRS1Q6ZNA5 592 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 TEX19Q8NA77 164 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 ZFP62Q8NB50 900 aaPredicted RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 HIPK4Q8NE63 616 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 BHLHE22Q8NFJ8 381 aaPredicted RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 OR2T12Q8NG77 320 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 SLC38A5Q8WUX1 472 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 TMEM19Q96HH6 336 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 FRMD6Q96NE9 622 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 TREX2Q9BQ50 279 aaPredicted RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 DOHHQ9BU89 302 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 SPATA5L1Q9BVQ7 753 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 ALG2Q9H553 416 aa9.4□□□□□ -0.9
HTT-204ENST00000508321 ZNF71Q9NQZ8 489 aaPredicted RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 PRPF19Q9UMS4 504 aaKnown RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
HTT-204ENST00000508321 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 EML6Q6ZMW3 1958 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 IGLV3-32A0A0A0MS00 114 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 PRORSD1PA6NEY8 169 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 K7EM74 188 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SNPHO15079 494 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 PEX1O43933 1283 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 FADS1O60427 444 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SORBS2O94875 1100 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 UBOX5O94941 541 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 OXSR1O95747 527 aaPredicted RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 F10P00742 488 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 DBIP07108 87 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 CHRM4P08173 479 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 CNR1P21554 472 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 MASP1P48740 699 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 CASP9P55211 416 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 SELPLGQ14242 412 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 GANABQ14697 944 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 SYPL1Q16563 259 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 HYAL4Q2M3T9 481 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 VMACQ2NL98 169 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 GRAMD1BQ3KR37 738 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SAMD4BQ5PRF9 694 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 FAM180AQ6UWF9 173 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 C6orf89Q6UWU4 347 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 BNC2Q6ZN30 1099 aaPredicted RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 GALNTL5Q7Z4T8 443 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 MDGA2Q7Z553 956 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 PATL1Q86TB9 770 aaKnown RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 CALHM3Q86XJ0 350 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SLC15A3Q8IY34 581 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 ANKFN1Q8N957 763 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 TOR1AIP2Q8NFQ8 470 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 OR2M7Q8NG81 312 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 OR5M3Q8NGP4 307 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 OR10A6Q8NH74 314 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 GRHL3Q8TE85 626 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 RASSF5Q8WWW0 418 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 NTNG2Q96CW9 530 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 NODALQ96S42 347 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 ZNF607Q96SK3 696 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SLC38A1Q9H2H9 487 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 EVA1AQ9H8M9 152 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 MTHFD2LQ9H903 347 aaPredicted RBP9.39□□□□□ -0.91
HTT-204ENST00000508321 QPCTLQ9NXS2 382 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 TMEM181Q9P2C4 612 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 SLC35A3Q9Y2D2 325 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 IFT52Q9Y366 437 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 DTNAQ9Y4J8 743 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 CSAG2Q9Y5P2 127 aa9.39□□□□□ -0.91
HTT-204ENST00000508321 KCNE3Q9Y6H6 103 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms