RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 TM9SF2Q99805 663 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 HRASLS2Q9NWW9 162 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 SEC14L4Q9UDX3 406 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 FAM183AA6NL82 134 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 FGF17O60258 216 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 ZNF181Q2M3W8 571 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 MINDY2Q8NBR6 621 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 BBS1Q8NFJ9 593 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 OR4Q3Q8NH05 313 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 NT5CQ8TCD5 201 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 GPR151Q8TDV0 419 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 RIPOR3Q96MK2 946 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 ZFYVE21Q9BQ24 234 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 SMURF1Q9HCE7 757 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 NDUFB11Q9NX14 153 aa20.54■□□□□ 0.88
SPCS3-203ENST00000507678 TESQ9UGI8 421 aaKnown RBP20.54■□□□□ 0.88
SPCS3-203ENST00000507678 SAGE2PA6NJ88 616 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 PEX12O00623 359 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 PRKAR1BP31321 381 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 TNFSF8P32971 234 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 HTR4Q13639 388 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 LAX1Q8IWV1 398 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 ZNF614Q8N883 585 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 TM9SF4Q92544 642 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 A3GALT2U3KPV4 340 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 TDRD6O60522 2096 aaKnown RBP20.53■□□□□ 0.88
SPCS3-203ENST00000507678 A6NCN8 305 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 NOTOA8MTQ0 251 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 CDC42EP2O14613 210 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 PRODHO43272 600 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 HCRTR1O43613 425 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 SSX4O60224 188 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 APBB3O95704 486 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 MLLT11Q13015 90 aaPredicted RBP20.53■□□□□ 0.88
SPCS3-203ENST00000507678 ZMAT1Q5H9K5 638 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 TUBA3EQ6PEY2 450 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 SMARCD3Q6STE5 483 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 ABHD13Q7L211 337 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 SDF2Q99470 211 aa20.53■□□□□ 0.88
SPCS3-203ENST00000507678 TRIM45Q9H8W5 580 aaPredicted RBP20.53■□□□□ 0.88
SPCS3-203ENST00000507678 SPTBP11277 2137 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 CTSBP07858 339 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SOX18P35713 384 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 ATP6V1E1P36543 226 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 ARFIP1P53367 373 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 CDH11P55287 796 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 VSX2P58304 361 aaPredicted RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 RPS25P62851 125 aaKnown RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 ADAM15Q13444 863 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 LARS2Q15031 903 aaKnown RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 PRAMEF8Q5VWM4 474 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 PRAMEF7Q5VXH5 474 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 OR2L13Q8N349 312 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SYT14Q8NB59 555 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 CAMKVQ8NCB2 501 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 ACOT11Q8WXI4 607 aaPredicted RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 TM4SF19Q96DZ7 209 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SLC30A2Q9BRI3 323 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 MTHFD2LQ9H903 347 aaPredicted RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 CPNE7Q9UBL6 633 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SCML1Q9UN30 329 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SLC22A7Q9Y694 548 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 URADA6NGE7 173 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 KLHL22Q53GT1 634 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SPATC1Q76KD6 591 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 LAPTM4BQ86VI4 370 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 SAMD8Q96LT4 415 aa20.52■□□□□ 0.88
SPCS3-203ENST00000507678 TP63Q9H3D4 680 aaPredicted RBP20.52■□□□□ 0.88
SPCS3-203ENST00000507678 LAMA1P25391 3075 aa20.52■□□□□ 0.87
SPCS3-203ENST00000507678 SGK494L7N484 410 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 AKT2P31751 481 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 WNT4P56705 351 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 EFNB1P98172 346 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 HEPHL1Q6MZM0 1159 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 RASSF6Q6ZTQ3 369 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 SLC22A18ASQ8N1D0 253 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 ZFPM2Q8WW38 1151 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 DPH1Q9BZG8 443 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 TXNL4BQ9NX01 149 aaKnown RBP20.51■□□□□ 0.87
SPCS3-203ENST00000507678 CD207Q9UJ71 328 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 PCOLCE2Q9UKZ9 415 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.51■□□□□ 0.87
SPCS3-203ENST00000507678 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.51■□□□□ 0.87
SPCS3-203ENST00000507678 HYKKA2RU49 373 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 KCNK2O95069 426 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 RORCP51449 518 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 CAV3P56539 151 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 RUNX1T1Q06455 604 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 SLC35F1Q5T1Q4 408 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 DESI1Q6ICB0 168 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 COX18Q8N8Q8 333 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 FBRSQ9HAH7 460 aa20.51■□□□□ 0.87
SPCS3-203ENST00000507678 ZNF670-ZNF695F2Z2N8 137 aa20.5■□□□□ 0.87
SPCS3-203ENST00000507678 GABRG2P18507 467 aa20.5■□□□□ 0.87
SPCS3-203ENST00000507678 HNRNPA0Q13151 305 aaKnown RBP20.5■□□□□ 0.87
SPCS3-203ENST00000507678 CRTC2Q53ET0 693 aaPredicted RBP20.5■□□□□ 0.87
SPCS3-203ENST00000507678 TAF8Q7Z7C8 310 aa20.5■□□□□ 0.87
SPCS3-203ENST00000507678 CCDC190Q86UF4 302 aa20.5■□□□□ 0.87
SPCS3-203ENST00000507678 PFN4Q8NHR9 129 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms