RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TOE1Q96GM8 510 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 FAM46AQ96IP4 442 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 CMTM3Q96MX0 182 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 TIMP4Q99727 224 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 KCNK12Q9HB15 430 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 LHX9Q9NQ69 397 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ABRACLQ9P1F3 81 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 POMT2Q9UKY4 750 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 TMEM5Q9Y2B1 443 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 LOC105369274A0A096LPK9 316 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 C17orf113A0A1B0GUU1 675 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 DVL2O14641 736 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ACADLP28330 430 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SRP9P49458 86 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ZNF697Q5TEC3 545 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 RRM2BQ7LG56 351 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 CFAP206Q8IYR0 622 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 OR4N4Q8N0Y3 316 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 FAM98AQ8NCA5 519 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 OR2T33Q8NG76 320 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 OR6C4Q8NGE1 309 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 CEP76Q8TAP6 659 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 MOAP1Q96BY2 351 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 KLHL15Q96M94 604 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 AMDHD1Q96NU7 426 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 AIF1LQ9BQI0 150 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ALG8Q9BVK2 526 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ZCCHC2Q9C0B9 1178 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 GLIPR2Q9H4G4 154 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ZCCHC4Q9H5U6 513 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ISG20L2Q9H9L3 353 aaKnown RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 WASH6PQ9NQA3 447 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 CNIH4Q9P003 139 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SIRT4Q9Y6E7 314 aaPredicted RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 SLC9B1P1A6NJY1 282 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 LRRN3E7EW58 273 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 ZNF593O00488 134 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 CFDP00746 253 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 SAGP10523 405 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 ALPPL2P10696 532 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 ERGP11308 486 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 ATF4P18848 351 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 PBLDP30039 288 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 RECQLP46063 649 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 RPS7P62081 194 aaKnown RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 KLF9Q13886 244 aaPredicted RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 FAM69AQ5T7M9 428 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 IL20RBQ6UXL0 311 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 SLITRK4Q8IW52 837 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 TCEAL8Q8IYN2 117 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 REG4Q9BYZ8 158 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 LRRN3Q9H3W5 708 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 HINT3Q9NQE9 182 aaKnown RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 SEMA4GQ9NTN9 838 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 ZCCHC3Q9NUD5 404 aaKnown RBP16.59■□□□□ 0.25
NUP54-205ENST00000507257 RDH8Q9NYR8 311 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 CAMK2AQ9UQM7 478 aa16.59■□□□□ 0.25
NUP54-205ENST00000507257 TRAV1-2A0A0B4J238 106 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 RTCAO00442 366 aaKnown RBP16.58■□□□□ 0.25
NUP54-205ENST00000507257 PEX14O75381 377 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 ACSM4P0C7M7 580 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 ZP1P60852 638 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 RAB33AQ14088 237 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 MBOAT2Q6ZWT7 520 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 CXXC5Q7LFL8 322 aaKnown RBP16.58■□□□□ 0.25
NUP54-205ENST00000507257 OVCH2Q7RTZ1 564 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 KIAA0907Q7Z7F0 614 aaPredicted RBP16.58■□□□□ 0.25
NUP54-205ENST00000507257 CMTM8Q8IZV2 173 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.58■□□□□ 0.25
NUP54-205ENST00000507257 FAM71CQ8NEG0 241 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 BBS1Q8NFJ9 593 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 OR2T35Q8NGX2 323 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 OR5W2Q8NH69 310 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 RGMAQ96B86 450 aa16.58■□□□□ 0.25
NUP54-205ENST00000507257 MFSD2BA6NFX1 497 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 SOCS6O14544 535 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 IFNA16P05015 189 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 NDUFV2P19404 249 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 PAICSP22234 425 aaKnown RBP16.58■□□□□ 0.24
NUP54-205ENST00000507257 REEP5Q00765 189 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 ZNF311Q5JNZ3 666 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 NDUFAF5Q5TEU4 345 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 TMEM81Q6P7N7 255 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 ZNF687Q8N1G0 1237 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 ANKRD53Q8N9V6 530 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 RAD51AP1Q96B01 352 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 ZNF514Q96K75 400 aaPredicted RBP16.58■□□□□ 0.24
NUP54-205ENST00000507257 COQ10AQ96MF6 247 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 SHARPINQ9H0F6 387 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 MRPL17Q9NRX2 175 aaKnown RBP16.58■□□□□ 0.24
NUP54-205ENST00000507257 TDP1Q9NUW8 608 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 NLGN3Q9NZ94 848 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms