RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, human

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL3-208	ENST00000506873	OR4D11	Q8NGI4	311 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	APOBEC4	Q8WW27	367 aa	Known RBP	13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	PMM1	Q92871	262 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	OMA1	Q96E52	524 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZNF354B	Q96LW1	612 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	EFHD1	Q9BUP0	239 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	SEMA6A	Q9H2E6	1030 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	FLRT3	Q9NZU0	649 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	BAG5	Q9UL15	447 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	IFT52	Q9Y366	437 aa		13.55	□□□□□ -0.24
KLHL3-208	ENST00000506873	PCSK5	Q92824	1860 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	NPIPB9	F8W1W9	429 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	hCG_2039718	K7EN88	272 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	NKX2-8	O15522	239 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	TSPAN2	O60636	221 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	ABCB7	O75027	752 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	DIRAS1	O95057	198 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	LGI1	O95970	557 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	DBI	P07108	87 aa	Known RBP	13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	ATP12A	P54707	1039 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	NRG3	P56975	720 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	SLC34A1	Q06495	639 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	IFI44L	Q53G44	452 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	HMBOX1	Q6NT76	420 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZDHHC21	Q8IVQ6	265 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	SLC34A3	Q8N130	599 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	PQLC1	Q8N2U9	271 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	PROX1	Q92786	737 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	FGF11	Q92914	225 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	FAM122A	Q96E09	287 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	PINK1	Q9BXM7	581 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	AMBRA1	Q9C0C7	1298 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	MRTO4	Q9UKD2	239 aa	Known RBP	13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	MSRB2	Q9Y3D2	182 aa		13.54	□□□□□ -0.24
KLHL3-208	ENST00000506873	MGA	Q8IWI9	3026 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	FRS3	O43559	492 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	UGT2B11	O75310	529 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	NADK	O95544	446 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	RPS4Y1	P22090	263 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	KRT20	P35900	424 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	DCT	P40126	519 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	MAGEA2	P43356	314 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	YAP1	P46937	504 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PSMD4	P55036	377 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	EEF1A1	P68104	462 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	LARS2	Q15031	903 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	CMPK2	Q5EBM0	449 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	DCAF10	Q5QP82	559 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	APOOL	Q6UXV4	268 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	LACC1	Q8IV20	430 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	TAGAP	Q8N103	731 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZNF614	Q8N883	585 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	VPS50	Q96JG6	964 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PRR14	Q9BWN1	585 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	CDCP1	Q9H5V8	836 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	UBQLN4	Q9NRR5	601 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	NDUFAF4	Q9P032	175 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ABCG2	Q9UNQ0	655 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	CNTRL	Q7Z7A1	2325 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	SEMA7A	O75326	666 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	BCAS1	O75363	584 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ITGA10	O75578	1167 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	UTS2	O95399	124 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	CST1	P01037	141 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	FABP3	P05413	133 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	SERPINA7	P05543	415 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	CYP4B1	P13584	511 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	NID1	P14543	1247 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	FAS	P25445	335 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	IL12B	P29460	328 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PRKAR1B	P31321	381 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PNLIPRP2	P54317	469 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ACACA	Q13085	2346 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZNF141	Q15928	474 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	KLHL26	Q53HC5	615 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	IRAK1BP1	Q5VVH5	260 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	ZNF836	Q6ZNA1	936 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	RPS19BP1	Q86WX3	136 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	OR5M3	Q8NGP4	307 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	GEMIN6	Q8WXD5	167 aa	Known RBP	13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PSMF1	Q92530	271 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	IP6K3	Q96PC2	410 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	RASL10B	Q96S79	203 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	AGPAT4	Q9NRZ5	378 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	RIMS3	Q9UJD0	308 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873	PCDHGA10	Q9Y5H3	936 aa		13.53	□□□□□ -0.24
KLHL3-208	ENST00000506873		M0R3H8	397 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	CLOCK	O15516	846 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	ICOSLG	O75144	302 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	THBS1	P07996	1170 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	ID4	P47928	161 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	FBXW4	P57775	412 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	PLAUR	Q03405	335 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	GRAMD1B	Q3KR37	738 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	MRPL2	Q5T653	305 aa	Known RBP	13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	DHRS4L2	Q6PKH6	230 aa		13.52	□□□□□ -0.25
KLHL3-208	ENST00000506873	ERMP1	Q7Z2K6	904 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms