RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF559Q9BR84 538 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 C3orf14Q9HBI5 128 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 EQTNQ9NQ60 294 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 SDHAF3Q9NRP4 125 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 ASIC5Q9NY37 505 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 MED11Q9P086 117 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 DKKL1Q9UK85 242 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 AKAP6Q13023 2319 aa8.21□□□□□ -1.1
PDLIM5-209ENST00000506632 TM9SF1O15321 606 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 BIRC5O15392 142 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 RGS16O15492 202 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SKAP2O75563 359 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 KCNK2O95069 426 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 OXSR1O95747 527 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ANGPTL1O95841 491 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SERPINE1P05121 402 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 TMIGD3P0DMS9 266 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 PEPDP12955 493 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 DDX5P17844 614 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 EFNA1P20827 205 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 VAMP1P23763 118 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 LCN1P31025 176 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 OPRM1P35372 400 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 RPL3P39023 403 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 PRKAG1P54619 331 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 DIO3P55073 304 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SRYQ05066 204 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 C17orf67Q0P5P2 114 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 FOXF2Q12947 444 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 MYBPHQ13203 477 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 MPP2Q14168 576 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 DUSP5Q16690 384 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SMU1Q2TAY7 513 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 GLYR1Q49A26 553 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ATP6AP1LQ52LC2 224 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 IL23RQ5VWK5 629 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 PLXDC2Q6UX71 529 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 CAMKMTQ7Z624 323 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 CDH24Q86UP0 819 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 OR4C3Q8NH37 302 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 GPR151Q8TDV0 419 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 DUSP19Q8WTR2 217 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 NUDT8Q8WV74 236 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SLC9A6Q92581 669 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 COQ8BQ96D53 544 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 C16orf58Q96GQ5 468 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 C1orf50Q9BV19 199 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 SFXN3Q9BWM7 321 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 C20orf27Q9GZN8 174 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 DUSP22Q9NRW4 184 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 HAO1Q9UJM8 370 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 RPH3AQ9Y2J0 694 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ACTL7BQ9Y614 415 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 ABCA4P78363 2273 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 HIVEP1P15822 2718 aa8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 NUP214P35658 2090 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-209ENST00000506632 MPDZO75970 2070 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 OR2M5A3KFT3 312 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ESPNB1AK53 854 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 LINC01387J3KSC0 135 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CTAG2O75638 210 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TNFSF13O75888 250 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 HSPA4LO95757 839 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TGM6O95932 706 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TUBBP07437 444 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 G6PDP11413 515 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 HK1P19367 917 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 POU3F2P20265 443 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PRPS1L1P21108 318 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TBXA2RP21731 343 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 UQCRC1P31930 480 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 KIR2DL3P43628 341 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 RFX3P48380 749 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PRIM2P49643 509 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CLK3P49761 638 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 AGFG1P52594 562 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 DGKQP52824 942 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ABCE1P61221 599 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 SORDQ00796 357 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 EMX2Q04743 252 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 STX5Q13190 355 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 SNTB1Q13884 538 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CHI3L2Q15782 390 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 FLYWCH1Q4VC44 716 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CPTPQ5TA50 214 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 BLOC1S3Q6QNY0 202 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ZZZ3Q8IYH5 903 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 KRTCAP2Q8N6L1 136 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 NATD1Q8N6N6 113 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF781Q8N8C0 355 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms