RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 C20orf204Q6ZNR8 217 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 FAM214BQ7L5A3 538 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 ZNF550Q7Z398 422 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 CNPY4Q8N129 248 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.313e-43■■■□□ 16.6
SEC24D-208ENST00000506622 Q96MF0 132 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 LMF2Q9BU23 707 aaKnown RBP13.1□□□□□ -0.31
SEC24D-208ENST00000506622 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
SEC24D-208ENST00000506622 RRAGDQ9NQL2 400 aaPredicted RBP13.1□□□□□ -0.31
SEC24D-208ENST00000506622 H3BQF6 201 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 H7C1Q1 480 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 UBFD1O14562 309 aaKnown RBP13.09□□□□□ -0.31
SEC24D-208ENST00000506622 RIPK2O43353 540 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 GMFGO60234 142 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 ANGPTL1O95841 491 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 LY6G6DO95868 133 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
SEC24D-208ENST00000506622 MYL2P10916 166 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 CCKARP32238 428 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 PRR5P85299 388 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 VPS26BQ4G0F5 336 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 ANKRD34AQ69YU3 496 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 NOXRED1Q6NXP6 359 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 IKBIPQ70UQ0 350 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 TRIM46Q7Z4K8 759 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 YTHDF3Q7Z739 585 aaKnown RBP13.09□□□□□ -0.31
SEC24D-208ENST00000506622 METTL25Q8N6Q8 603 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 NUDT8Q8WV74 236 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 PERPQ96FX8 193 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 COX4I2Q96KJ9 171 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
SEC24D-208ENST00000506622 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 EQTNQ9NQ60 294 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 PSMC3IPQ9P2W1 217 aaPredicted RBP13.09□□□□□ -0.31
SEC24D-208ENST00000506622 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 EMC9Q9Y3B6 208 aa13.09□□□□□ -0.31
SEC24D-208ENST00000506622 COL6A5A8TX70 2615 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 ATRQ13535 2644 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.32
SEC24D-208ENST00000506622 SEC22BO75396 215 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 RSL1D1O76021 490 aaKnown RBP13.08□□□□□ -0.32
SEC24D-208ENST00000506622 AQP8O94778 261 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 PRPS2P11908 318 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 PPP3CBP16298 524 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 GPC1P35052 558 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 EIF1AXP47813 144 aaKnown RBP13.08□□□□□ -0.32
SEC24D-208ENST00000506622 CTBP2P56545 445 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 CFAP157Q5JU67 520 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 FANCFQ9NPI8 374 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 PAQR5Q9NXK6 330 aaPredicted RBP13.08□□□□□ -0.32
SEC24D-208ENST00000506622 VDAC3Q9Y277 283 aa13.08□□□□□ -0.32
SEC24D-208ENST00000506622 GXYLT2A0PJZ3 443 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 SHISA8B8ZZ34 492 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 G3V2L1 256 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 NDUFB5O43674 189 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 IFI6P09912 130 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 HSPB3Q12988 150 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 GUSBP1Q15486 140 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 TMEM44Q2T9K0 475 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 GRAMD1BQ3KR37 738 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 APOOLQ6UXV4 268 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 ZYG11AQ6WRX3 759 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 GGNQ86UU5 652 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 WDR75Q8IWA0 830 aaKnown RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 OR6K3Q8NGY3 331 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 CEP70Q8NHQ1 597 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 GMPPAQ96IJ6 420 aaPredicted RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 METTL2AQ96IZ6 378 aaKnown RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 EGLN2Q96KS0 407 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 MARK4Q96L34 752 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 PLSCR4Q9NRQ2 329 aa13.07□□□□□ -0.32
SEC24D-208ENST00000506622 MCTS1Q9ULC4 181 aaKnown RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
SEC24D-208ENST00000506622 NUP214P35658 2090 aaPredicted RBP13.06□□□□□ -0.32
SEC24D-208ENST00000506622 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
SEC24D-208ENST00000506622 A0A087WZY1 265 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 PDPK1O15530 556 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 GLRA3O75311 464 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 SYNGR4O95473 234 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 IGKV1D-16P01601 117 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 UROSP10746 265 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 ZNF17P17021 662 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 PRKAG1P54619 331 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 BEX5Q5H9J7 111 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
SEC24D-208ENST00000506622 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms