RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CA5BQ9Y2D0 317 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF256Q9Y2P7 627 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 GMPPBQ9Y5P6 360 aa2.89□□□□□ -1.95
TOPBP1-204ENST00000505804 CHD4Q14839 1912 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 A0A0U1RQV5 110 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 EPOPA6NHQ4 379 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 SAGE2PA6NJ88 616 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 VPS26AO75436 327 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF254O75437 659 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 DUX4L4P0CJ87 422 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 RGRP47804 291 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 MTTPP55157 894 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 RPS8P62241 208 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 RPL32P62910 135 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF154Q13106 437 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF79Q15937 498 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 TEX44Q53QW1 395 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 FAM120AOSQ5T036 256 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF544Q6NX49 715 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 HSD11B1LQ7Z5J1 315 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 PRR22Q8IZ63 422 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ARNTL2Q8WYA1 636 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 PINX1Q96BK5 328 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 PHYHIPLQ96FC7 376 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZIM3Q96PE6 472 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 TBCDQ9BTW9 1192 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 PNO1Q9NRX1 252 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 EIF3LQ9Y262 564 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 FLVCR1Q9Y5Y0 555 aa2.88□□□□□ -1.95
TOPBP1-204ENST00000505804 CCDC7Q96M83 1385 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 FAM74A7A6NL05 159 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 ZFP92A6NM28 416 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LRRC30A6NM36 301 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 TRIM3O75382 744 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 SCRG1O75711 98 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LYPD3O95274 346 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 PGK1P00558 417 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 ANXA3P12429 323 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 CD1EP15812 388 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 CCND2P30279 289 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 AXLP30530 894 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 PTGFRP43088 359 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LIM2P55344 173 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 STX17P56962 302 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 OSTNP61366 133 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 HSF2Q03933 536 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 OVGP1Q12889 678 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 DPYSQ14117 519 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 DPYSL3Q14195 570 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 TRIP10Q15642 601 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 FAM74A3Q4VXF1 159 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 SCYL2Q6P3W7 929 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 UNC5DQ6UXZ4 953 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 TMEM184AQ6ZMB5 413 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LANCL3Q6ZV70 420 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 LHFPL4Q7Z7J7 247 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 VASH2Q86V25 355 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 IFNEQ86WN2 208 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 CBWD2Q8IUF1 395 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 MISPQ8IVT2 679 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 ZNF564Q8TBZ8 553 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 SELENOMQ8WWX9 145 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 NUS1Q96E22 293 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 DHTKD1Q96HY7 919 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 VPS39Q96JC1 886 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 B3GALT6Q96L58 329 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 TESK2Q96S53 571 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 C19orf24Q9BVV8 132 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 POLR3FQ9H1D9 316 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 ABCB10Q9NRK6 738 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 ABCG2Q9UNQ0 655 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 MTF2Q9Y483 593 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 AP4B1Q9Y6B7 739 aa2.87□□□□□ -1.95
TOPBP1-204ENST00000505804 SDHDO14521 159 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 OR7A17O14581 309 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 STX11O75558 287 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 SERF1AO75920 110 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 AKR7A3O95154 331 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 ANP32DO95626 131 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 HSPB1P04792 205 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 H2AFXP16104 143 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 ZP3P21754 424 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 DPP4P27487 766 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 UGT1A3P35503 534 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 GNPDA1P46926 289 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 OR3A4PP47883 348 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 DIO3P55073 304 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 RPL8P62917 257 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 PRR4Q16378 134 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 SBK1Q52WX2 424 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 DCST2Q5T1A1 773 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 LRRC70Q7Z2Q7 622 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 TRPM8Q7Z2W7 1104 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 OR2T33Q8NG76 320 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 OR9A4Q8NGU2 314 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 FAM122AQ96E09 287 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 TMEM80Q96HE8 168 aa2.86□□□□□ -1.95
TOPBP1-204ENST00000505804 HPDLQ96IR7 371 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms