RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 AP3S1Q92572 193 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RAB8BQ92930 207 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PDLIM5Q96HC4 596 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM41AQ96HV5 264 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RCC1LQ96I51 464 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MRPL13Q9BYD1 178 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FXYD6Q9H0Q3 95 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 DSN1Q9H410 356 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 NIT2Q9NQR4 276 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM184CQ9NVA4 438 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C5AR2Q9P296 337 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CFAP97Q9P2B7 532 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GRIP1Q9Y3R0 1128 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZFP37Q9Y6Q3 630 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 WDFY3Q8IZQ1 3526 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3DA0A087WVF3 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3IA0A087WXS9 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3EA0A087X179 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3KA0A087X1G2 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CCDC187A0A096LP49 1063 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3FA6NER0 549 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 METTL15A6NJ78 407 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GLOD5A6NK44 160 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 AQP12BA6NM10 295 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3LB9A6J9 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MCIDASD6RGH6 385 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PROB1E7EW31 1015 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 M0R2N6 131 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OR1F1O43749 312 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RGS9O75916 674 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SOX30O94993 753 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RPLP0P05388 317 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3HP0C7X1 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RAP2AP10114 183 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 UROSP10746 265 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ACVRL1P37023 503 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PLA2G5P39877 138 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RFC3P40938 356 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MAP3K8P41279 467 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ACAA2P42765 397 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR4P46093 362 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR17Q13304 367 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TPBGQ13641 420 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 EXOSC2Q13868 293 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CYP1B1Q16678 543 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF181Q2M3W8 571 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LGALSLQ3ZCW2 172 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CYBRD1Q53TN4 286 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 BICRALQ6AI39 1079 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3GQ6DHY5 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3CQ6IPX1 549 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GDF6Q6KF10 455 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC30A6Q6NXT4 461 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF782Q6ZMW2 699 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMCO2Q7Z6W1 182 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MARCH9Q86YJ5 346 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CEP97Q8IW35 865 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TBC1D3Q8IZP1 549 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LGI4Q8N135 537 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ARMC10Q8N2F6 343 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM199Q8N511 208 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OR10G2Q8NGC3 310 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF563Q8TA94 476 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C1orf216Q8TAB5 229 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SPACA9Q96E40 222 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C5orf34Q96MH7 638 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 KCNJ15Q99712 375 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PELOQ9BRX2 385 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FAIM2Q9BWQ8 316 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GTPBP2Q9BX10 602 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 NSUN3Q9H649 340 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF385DQ9H6B1 395 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MRPL17Q9NRX2 175 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZCCHC3Q9NUD5 404 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OXSMQ9NWU1 459 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ERVK13-1Q9NX77 482 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CHRNA9Q9UGM1 479 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MGAT4BQ9UQ53 548 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 POLEQ07864 2286 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 DNAJC25-GNG10A0A024R161 153 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LOC105371242A0A075B767 164 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM86C2PA6NEL3 165 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 BBIP1A8MTZ0 92 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RPL36A-HNRNPH2H7BZ11 118 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 DLEU1O43261 78 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ECI2O75521 394 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 VIPP01282 170 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 IFNA4P05014 189 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 HLA-DQB2P05538 268 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C8orf89P0DMQ9 161 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC2A2P11168 524 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ENGP17813 658 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OGNP20774 298 aaKnown RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LHCGRP22888 699 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 RPS3P23396 243 aaKnown RBP eCLIP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 EPHA8P29322 1005 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SDC2P34741 201 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ARR3P36575 388 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 DGKGP49619 791 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms