RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CPA2P48052 419 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 SERPINB4P48594 390 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 VSNL1P62760 191 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 PRR5P85299 388 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 CPTPQ5TA50 214 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 RAET1LQ5VY80 246 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 SZRD1Q7Z422 152 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 LUZP2Q86TE4 346 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 UBQLNLQ8IYU4 475 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 NATD1Q8N6N6 113 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 OR6Y1Q8NGX8 325 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 CLHC1Q8NHS4 586 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 PIK3R3Q92569 461 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 NINJ1Q92982 152 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 RMND5BQ96G75 393 aaPredicted RBP10.81□□□□□ -0.68
MED28-203ENST00000503945 FCRL1Q96LA6 429 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 GPATCH1Q9BRR8 931 aaKnown RBP10.81□□□□□ -0.68
MED28-203ENST00000503945 GSX1Q9H4S2 264 aaPredicted RBP10.81□□□□□ -0.68
MED28-203ENST00000503945 FLRT3Q9NZU0 649 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 NTMQ9P121 344 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 NDRG3Q9UGV2 375 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 LGALS13Q9UHV8 139 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 ST6GALNAC2Q9UJ37 374 aa10.81□□□□□ -0.68
MED28-203ENST00000503945 A0A1W2PRB8 838 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 SLC22A20A6NK97 555 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 A8MXE2 369 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 PIP5K1BO14986 540 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 NDUFB5O43674 189 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 LYPLA1O75608 230 aaPredicted RBP10.8□□□□□ -0.68
MED28-203ENST00000503945 NKX2-2O95096 273 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 HSPA4LO95757 839 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 TGM6O95932 706 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 TBXA2RP21731 343 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 FRKP42685 505 aaPredicted RBP10.8□□□□□ -0.68
MED28-203ENST00000503945 PRIM2P49643 509 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 B3GALT5-AS1P59052 145 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 RPS3AP61247 264 aaKnown RBP10.8□□□□□ -0.68
MED28-203ENST00000503945 SORDQ00796 357 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 PDE7AQ13946 482 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 MLC1Q15049 377 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 SGCBQ16585 318 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
MED28-203ENST00000503945 ATP6AP1LQ52LC2 224 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 CDC20BQ86Y33 519 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 NUDCD3Q8IVD9 361 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 SLC16A11Q8NCK7 471 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 CHDHQ8NE62 594 aaPredicted RBP10.8□□□□□ -0.68
MED28-203ENST00000503945 OR4C3Q8NH37 302 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 PPP1R14CQ8TAE6 165 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 AGR3Q8TD06 166 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 C1GALT1C1Q96EU7 318 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 CHMP6Q96FZ7 201 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 C16orf58Q96GQ5 468 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 DACH2Q96NX9 599 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 YIPF4Q9BSR8 244 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 G6PC3Q9BUM1 346 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 MECRQ9BV79 373 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 RTN4RQ9BZR6 473 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 UBQLN4Q9NRR5 601 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 ATAD3AQ9NVI7 634 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 ATP6V1HQ9UI12 483 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 SNX8Q9Y5X2 465 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 AP4B1Q9Y6B7 739 aa10.8□□□□□ -0.68
MED28-203ENST00000503945 ANKHD1Q8IWZ3 2542 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 OR2M5A3KFT3 312 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 C17orf51A8MQB3 221 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 TMEM233B4DJY2 109 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 H3BML4 177 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 CTIFO43310 598 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 GMFGO60234 142 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 KCNK2O95069 426 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 IGKV1D-16P01601 117 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 BPGMP07738 259 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 PRPS1L1P21108 318 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 DNASE1P24855 282 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 LCN1P31025 176 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 HPCAL1P37235 193 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 MAP3K8P41279 467 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 CCT3P49368 545 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 SUCLG1P53597 346 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 PPP2R2AP63151 447 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 OCRLQ01968 901 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 FOXD4Q12950 439 aaPredicted RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 GRAMD1BQ3KR37 738 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 ZNF385BQ569K4 471 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 C6orf136Q5SQH8 315 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 IL23RQ5VWK5 629 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 WDR93Q6P2C0 686 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 ZCCHC23Q6ZST2 131 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 GCNT2Q8N0V5 402 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 CNEP1R1Q8N9A8 125 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 FNDC5Q8NAU1 212 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 OR5M1Q8NGP8 315 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 FAM110BQ8TC76 370 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms