RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 OPN1SWP03999 348 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 ATP6V1B2P21281 511 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 DCTP40126 519 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 GRAMD1BQ3KR37 738 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 LCN8Q6JVE9 175 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 PEX5LQ8IYB4 626 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 FAM13CQ8NE31 585 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 OR10G3Q8NGC4 313 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 WDR60Q8WVS4 1066 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 TAMM41Q96BW9 452 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 HOXD1Q9GZZ0 328 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 HPF1Q9NWY4 346 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 ABI3Q9P2A4 366 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 CXADRP78310 365 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 DMTNQ08495 405 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 SMYD1Q8NB12 490 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 OR52P1PQ8NH57 321 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 SLC26A7Q8TE54 656 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 HGDQ93099 445 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 SPATA5L1Q9BVQ7 753 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 RSPO3Q9BXY4 272 aaPredicted RBP18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 SEC14L3Q9UDX4 400 aa18.74■□□□□ 0.59
CDC42SE2-206ENST00000503291 PTPRQQ9UMZ3 2332 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 F10P00742 488 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 SERPINA1P01009 418 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 IFNA14P01570 189 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 IL7RP16871 459 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 TBXA2RP21731 343 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 CYB561P49447 251 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 HLCSP50747 726 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF141Q15928 474 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 PDZK1Q5T2W1 519 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 VRK2Q86Y07 508 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ARMC8Q8IUR7 673 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 DND1Q8IYX4 353 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 BHLHE22Q8NFJ8 381 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 OR52E4Q8NGH9 312 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 SNRNP27Q8WVK2 155 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 TTC9Q92623 222 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 TMCO6Q96DC7 493 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 LRGUKQ96M69 825 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 NODALQ96S42 347 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 DCAF13Q9NV06 445 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 EXPH5Q8NEV8 1989 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 OXSR1O95747 527 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 WDPCPO95876 746 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 DBIP07108 87 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 PABPC4LP0CB38 370 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 HPGDP15428 266 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 RPS4Y1P22090 263 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 CD96P40200 585 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ERFP50548 548 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 OC90Q02509 493 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 DUSP7Q16829 419 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 CYBRD1Q53TN4 286 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF311Q5JNZ3 666 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 BORAQ6PGQ7 559 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF614Q8N883 585 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 PLA2G3Q9NZ20 509 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF232Q9UNY5 417 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 IFT52Q9Y366 437 aa18.73■□□□□ 0.59
CDC42SE2-206ENST00000503291 CNTRLQ7Z7A1 2325 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 CPAMD8Q8IZJ3 1885 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 MFAP5Q13361 173 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 KLHL26Q53HC5 615 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 APOOLQ6UXV4 268 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 CYP4Z2PQ8N1L4 340 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF527Q8NB42 609 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 OR10Q1Q8NGQ4 319 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 SGCZQ96LD1 299 aa18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 UTP23Q9BRU9 249 aaKnown RBP18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 CACYBPQ9HB71 228 aaKnown RBP18.72■□□□□ 0.59
CDC42SE2-206ENST00000503291 CLDN24A6NM45 220 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 SCDO00767 359 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TP53I11O14683 189 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 FADS1O60427 444 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TPST1O60507 370 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF682O95780 498 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 EVI2BP34910 448 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 RNF144AP50876 292 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 SELENOWP63302 87 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TUBA3CQ13748 450 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 LARS2Q15031 903 aaKnown RBP18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TUBA3EQ6PEY2 450 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 CBLL1Q75N03 491 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 GPALPP1Q8IXQ4 340 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 GRHL3Q8TE85 626 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TRIM15Q9C019 465 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 DENND2DQ9H6A0 471 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 ADPRHL2Q9NX46 363 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 LRFN1Q9P244 771 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 DTNAQ9Y4J8 743 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 CHCHD2Q9Y6H1 151 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 TMEM229AB2RXF0 380 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 THBS1P07996 1170 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 NGFRP08138 427 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 CASRP41180 1078 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 ELOAQ14241 798 aaKnown RBP18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 MDGA2Q7Z553 956 aa18.71■□□□□ 0.59
CDC42SE2-206ENST00000503291 ZNF227Q86WZ6 799 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms