RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	NPIPA5	A0A0B4J1W7	369 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	NPIPA7	E9PJI5	369 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	PEX12	O00623	359 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ADAM10	O14672	748 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	PRSS23	O95084	383 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	LGI1	O95970	557 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	CAPNS1	P04632	268 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	FES	P07332	822 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	NPIPA8	P0DM63	369 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ABCD3	P28288	659 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ATP12A	P54707	1039 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	EEF1A1	P68104	462 aa	Known RBP	11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	VLDLR	P98155	873 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	CLN3	Q13286	438 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ATP1A4	Q13733	1029 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	GPR68	Q15743	365 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	NRF1	Q16656	503 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	FLYWCH1	Q4VC44	716 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	IFI44L	Q53G44	452 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	RNF220	Q5VTB9	566 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	H3F3C	Q6NXT2	135 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	VRK2	Q86Y07	508 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	PEX5L	Q8IYB4	626 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	OR4D11	Q8NGI4	311 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	OR52P1P	Q8NH57	321 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	GEMIN6	Q8WXD5	167 aa	Known RBP	11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	LZIC	Q8WZA0	190 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	HPS1	Q92902	700 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	TMBIM1	Q969X1	311 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	OMA1	Q96E52	524 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	VPS50	Q96JG6	964 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ZNF354B	Q96LW1	612 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	IP6K3	Q96PC2	410 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	PKP2	Q99959	881 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	WFDC6	Q9BQY6	131 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	EFHD1	Q9BUP0	239 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	SCNM1	Q9BWG6	230 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	RASSF4	Q9H2L5	321 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	LIN28A	Q9H9Z2	209 aa	Known RBP	11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	AGPAT4	Q9NRZ5	378 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	MYOT	Q9UBF9	498 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	SEC14L3	Q9UDX4	400 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	BAG5	Q9UL15	447 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	AURKC	Q9UQB9	309 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	IFT52	Q9Y366	437 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	MSRB2	Q9Y3D2	182 aa		11.19	□□□□□ -0.62
MATR3-231	ENST00000502394	SPTBN2	O15020	2390 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	CDC14C	A4D256	554 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	MASP2	O00187	686 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	CASQ2	O14958	399 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	HNRNPR	O43390	633 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	TIPRL	O75663	272 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	SERPINA7	P05543	415 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	DBI	P07108	87 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	NGFR	P08138	427 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ITGAM	P11215	1152 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	CYP4B1	P13584	511 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ICAM2	P13598	275 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	NID1	P14543	1247 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	NAGA	P17050	411 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	WT1	P19544	449 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	SPINK2	P20155	84 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	TNFRSF1B	P20333	461 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ATP6V1C1	P21283	382 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	DCT	P40126	519 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	PNLIPRP2	P54317	469 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	PSMD4	P55036	377 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	PLCXD2	Q0VAA5	305 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	SRSF6	Q13247	344 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	LIN52	Q52LA3	116 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	CRTC2	Q53ET0	693 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ZNF311	Q5JNZ3	666 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	FNDC7	Q5VTL7	733 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	TCTN3	Q6NUS6	607 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ZNF836	Q6ZNA1	936 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	HMGN2P46	Q86SG4	172 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ZDHHC21	Q8IVQ6	265 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	PRR22	Q8IZ63	422 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	SLC15A4	Q8N697	577 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	OR4C3	Q8NH37	302 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	SPPL2A	Q8TCT8	520 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	LRTOMT	Q8WZ04	291 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	EFHD2	Q96C19	240 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	NAF1	Q96HR8	494 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	TPD52L3	Q96J77	140 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	ARHGDIG	Q99819	225 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	DEFB126	Q9BYW3	111 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	FLRT3	Q9NZU0	649 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	MRTO4	Q9UKD2	239 aa	Known RBP	11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	NPFFR2	Q9Y5X5	522 aa		11.18	□□□□□ -0.62
MATR3-231	ENST00000502394	OR6C70	A6NIJ9	312 aa		11.17	□□□□□ -0.62
MATR3-231	ENST00000502394	CLDN24	A6NM45	220 aa		11.17	□□□□□ -0.62
MATR3-231	ENST00000502394	WWP2	O00308	870 aa		11.17	□□□□□ -0.62
MATR3-231	ENST00000502394	DPM1	O60762	260 aa		11.17	□□□□□ -0.62
MATR3-231	ENST00000502394	UGT2B11	O75310	529 aa		11.17	□□□□□ -0.62
MATR3-231	ENST00000502394	SEMA7A	O75326	666 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms