RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	ARSF	P54793	590 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	UCN	P55089	124 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RAB38	P57729	211 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DSTN	P60981	165 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PPP1CA	P62136	330 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HSD11B2	P80365	405 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CDK6	Q00534	326 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HSPB3	Q12988	150 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GAB1	Q13480	694 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SQSTM1	Q13501	440 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RUNX2	Q13950	521 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SCARB2	Q14108	478 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GNA13	Q14344	377 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GRM7	Q14831	915 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CEBPE	Q15744	281 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TBR1	Q16650	682 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLPP	Q16740	277 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRTG	Q2VWP7	1150 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AMZ1	Q400G9	498 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GCNT6	Q5T4J0	391 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BROX	Q5VW32	411 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NKAIN2	Q5VXU1	208 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LPCAT4	Q643R3	524 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SAXO2	Q658L1	398 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C18orf63	Q68DL7	685 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM71	Q6P5X7	295 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	WDR74	Q6RFH5	385 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM64	Q6YI46	380 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	USP53	Q70EK8	1073 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CCDC80	Q76M96	950 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EIF3M	Q7L2H7	374 aa	Known RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF551	Q7Z340	670 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KANSL1	Q7Z3B3	1105 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PATL1	Q86TB9	770 aa	Known RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNF130	Q86XS8	419 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PTOV1	Q86YD1	416 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GATAD2A	Q86YP4	633 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GPR135	Q8IZ08	494 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADGRG5	Q8IZF4	528 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MMP21	Q8N119	569 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CA13	Q8N1Q1	262 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRRC25	Q8N386	305 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM169B	Q8N8A8	192 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANKFN1	Q8N957	763 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325		Q8N9G6	341 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ICA1L	Q8NDH6	482 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF248	Q8NDW4	579 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR56A1	Q8NGH5	318 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FBXO30	Q8TB52	745 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PNPT1	Q8TCS8	783 aa	Known RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SFXN5	Q8TD22	340 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SAP25	Q8TEE9	199 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NRG4	Q8WWG1	115 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRTOMT	Q8WZ04	291 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LZIC	Q8WZA0	190 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TANK	Q92844	425 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NAT6	Q93015	286 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EME1	Q96AY2	570 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLCO4A1	Q96BD0	722 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NEURL3	Q96EH8	262 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CNRIP1	Q96F85	164 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC47A1	Q96FL8	570 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CENPN	Q96H22	339 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC35G5	Q96KT7	338 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF184	Q99676	751 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PKP2	Q99959	881 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C9orf16	Q9BUW7	83 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CHID1	Q9BWS9	393 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	YIPF3	Q9GZM5	350 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325		Q9H521	79 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EPS8L2	Q9H6S3	715 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CXorf36	Q9H7Y0	433 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FANCE	Q9HB96	536 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NDUFA13	Q9P0J0	144 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KCMF1	Q9P0J7	381 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SEMA5B	Q9P283	1151 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C5AR2	Q9P296	337 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RIMS3	Q9UJD0	308 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SERTAD3	Q9UJW9	196 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BAG5	Q9UL15	447 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CDC14A	Q9UNH5	594 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	USP22	Q9UPT9	525 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ERVK-11	Q9UQG0	969 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANGPT4	Q9Y264	503 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NAALAD2	Q9Y3Q0	740 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DTNA	Q9Y4J8	743 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NPFFR2	Q9Y5X5	522 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BOD1L1	Q8NFC6	3051 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CROCC	Q5TZA2	2017 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MDC1	Q14676	2089 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TP53BP1	Q12888	1972 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IGHV5-51	A0A0C4DH38	117 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EME2	A4GXA9	379 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GLOD5	A6NK44	160 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325		H0YIG0	161 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325		K7ENP7	123 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SGK494	L7N484	410 aa		4.93	□□□□□ -1.62

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