RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 STX11O75558 287 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RB1P06400 928 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 HSD3B1P14060 373 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF8P17098 575 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RPL17P18621 184 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 SMIM11AP58511 58 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 TDGQ13569 410 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RBMS2Q15434 407 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF280BQ86YH2 543 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR4D11Q8NGI4 311 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR5M1Q8NGP8 315 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 GAS2L1Q99501 681 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACTR6Q9GZN1 396 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 MCOLN1Q9GZU1 580 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NOX3Q9HBY0 568 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ASIC5Q9NY37 505 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NTNG1Q9Y2I2 539 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ANKRD61A6NGH8 418 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMEM200CA6NKL6 621 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 D6RAR5 112 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 KDELR3O43731 214 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 CATP04040 527 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 FAM157BP0CG42 384 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 GMFBP60983 142 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RAB40BQ12829 278 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 HLXQ14774 488 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 LASP1Q14847 261 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ODF4Q2M2E3 257 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF697Q5TEC3 545 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 HEPHL1Q6MZM0 1159 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 C6orf120Q7Z4R8 191 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 PPP1R16AQ96I34 528 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ALG8Q9BVK2 526 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 TRMT61BQ9BVS5 477 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 TAS2R10Q9NYW0 307 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 KLK11Q9UBX7 282 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 GLS2Q9UI32 602 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 SCML2Q9UQR0 700 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 C1orf226A1L170 272 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 C8orf89P0DMQ9 161 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ARAFP10398 606 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 HK1P19367 917 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RPL9P32969 192 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZP1P60852 638 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 PLD1Q13393 1074 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 PIP5KL1Q5T9C9 394 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 HBMQ6B0K9 141 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NR2C2APQ86WQ0 139 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 BVESQ8NE79 360 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPR32P1Q8NGA4 272 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR6T1Q8NGN1 323 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 THAP6Q8TBB0 222 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RFKQ969G6 155 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NEIL2Q969S2 332 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 RAD51AP1Q96B01 352 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 OTUB2Q96DC9 234 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 POLDIP3Q9BY77 421 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 SYNPO2LQ9H987 977 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPN1Q9HCN4 374 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 PLAGL1Q9UM63 463 aa9.97□□□□□ -0.81
TRAPPC12-223ENST00000497597 NYNRINQ9P2P1 1898 aaKnown RBP9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 MFSD2BA6NFX1 497 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 CLDN11O75508 207 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 SOX30O94993 753 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACP5P13686 325 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 MAPK9P45984 424 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 CDH4P55283 916 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 BLOC1S1P78537 153 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 ARF5P84085 180 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 NDUFAF7Q7L592 441 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 COL26A1Q96A83 441 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 SAMD8Q96LT4 415 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 CYSLTR2Q9NS75 346 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 MARK1Q9P0L2 795 aa9.96□□□□□ -0.81
TRAPPC12-223ENST00000497597 C7orf66A4D0T2 115 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 TMEM202A6NGA9 273 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 RNF13O43567 381 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 CXCL14O95715 111 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 SERPINA3P01011 423 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 APEHP13798 732 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 PSMB1P20618 241 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 GJA5P36382 358 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 TRIM23P36406 574 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 STAT5AP42229 794 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 GCGRP47871 477 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 MEOX2P50222 304 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 E2F1Q01094 437 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 SMCO1Q147U7 214 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 GLB1LQ6UWU2 654 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 MSANTD1Q6ZTZ1 278 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 DDX53Q86TM3 631 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 OAFQ86UD1 273 aa9.96□□□□□ -0.82
TRAPPC12-223ENST00000497597 CMIPQ8IY22 773 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms