RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 GPR4P46093 362 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ATP1B3P54709 279 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 BRWD1-AS2P59051 145 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 YWHAEP62258 255 aaKnown RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CTAG1AP78358 180 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 IRF8Q02556 426 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GTF2H2Q13888 395 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GK3PQ14409 553 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SF3B4Q15427 424 aaKnown RBP eCLIP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SGSM1Q2NKQ1 1148 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 TMEM119Q4V9L6 283 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ASPRV1Q53RT3 343 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GTF2H2CQ6P1K8 395 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 LEG1Q6P5S2 330 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 UQCC3Q6UW78 93 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GCNT7Q6ZNI0 430 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 Q6ZRG5 221 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SLC24A5Q71RS6 500 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ANKRD37Q7Z713 158 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SATL1Q86VE3 508 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 RANBP3LQ86VV4 465 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SERPINA9Q86WD7 417 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 TMEM17Q86X19 198 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 MYOCDQ8IZQ8 938 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 POC1AQ8NBT0 407 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 RELL2Q8NC24 303 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 OR7A2PQ8NGA2 310 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CIDECQ96AQ7 238 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 PPP1R16AQ96I34 528 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SLC38A2Q96QD8 506 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ELOVL6Q9H5J4 265 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 EGLN3Q9H6Z9 239 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 DCTPP1Q9H773 170 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GPN2Q9H9Y4 310 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 FZD3Q9NPG1 666 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 HIF1ANQ9NWT6 349 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CHMP5Q9NZZ3 219 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 PSMC3IPQ9P2W1 217 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SLC7A8Q9UHI5 535 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 POMT2Q9UKY4 750 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 AGO1Q9UL18 857 aaKnown RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SLC7A7Q9UM01 511 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 TIMM10BQ9Y5J6 103 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 SALL1Q9NSC2 1324 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CPDO75976 1380 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 OVOS2A0A0J9YW53 1432 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 OVOS2Q6IE36 1432 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 EDC4Q6P2E9 1401 aaKnown RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 COL5A2P05997 1499 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 EP400Q96L91 3159 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 USP54Q70EL1 1684 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 COL18A1P39060 1754 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 LOC101059948A0A1B0GTJ6 334 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 A0A1B0GUH1 482 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 A0A1W2PNV4 684 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 FRG2CA6NGY1 282 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TUBAL3A6NHL2 446 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 SHISA7A6NL88 538 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TEX46H3BTG2 121 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 OR7A17O14581 309 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CFLARO15519 480 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 RS1O15537 224 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 B4GAT1O43505 415 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CNOT3O75175 753 aaKnown RBP5.38□□□□□ -1.55
BRCA1-224ENST00000497488 FCER2P06734 321 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 HSMCR30P0CW71 290 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 GSTM3P21266 225 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 HPCAL1P37235 193 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CRYBB2P43320 205 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 MAGEA5P43359 124 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 SLC7A2P52569 658 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 OR1D5P58170 312 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 PLP1P60201 277 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CSNK2BP67870 215 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TPM4P67936 248 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TFF2Q03403 129 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 C1orf61Q13536 156 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 PEX6Q13608 980 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CRMP1Q14194 572 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TAF13Q15543 124 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CHI3L2Q15782 390 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 C3AR1Q16581 482 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 PDSS1Q5T2R2 415 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 C1orf189Q5VU69 101 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 OTUD1Q5VV17 481 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-224ENST00000497488 RHBDD2Q6NTF9 364 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 GFRALQ6UXV0 394 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 Q6ZTK2 550 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 STXBP4Q6ZWJ1 553 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 KCNMB4Q86W47 210 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 ODF3L1Q8IXM7 274 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 FAM58AQ8N1B3 248 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 GABRG1Q8N1C3 465 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CLEC4FQ8N1N0 589 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CENPSQ8N2Z9 138 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 FBXL16Q8N461 479 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 KCNH5Q8NCM2 988 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 NDNFQ8TB73 568 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 CD300LFQ8TDQ1 290 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms