RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 NDUFA13Q9P0J0 144 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 OR1A1Q9P1Q5 309 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 FAM153AQ9UHL3 310 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 IGKV2-28A0A075B6P5 120 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 IGHV7-81A0A0B4J1V7 117 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 A0A0J9YXY3 114 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 MACROD2A1Z1Q3 448 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TUBAL3A6NHL2 446 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 SAGE2PA6NJ88 616 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ERVV-1B6SEH8 477 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TLR4O00206 839 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 PPIHO43447 177 aaKnown RBP1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CXCL14O95715 111 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 JCHAINP01591 159 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 IGKV2D-28P01615 120 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CHRNA1P02708 482 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 GNSP15586 552 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF44P15621 663 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 IGLL1P15814 213 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CCNA2P20248 432 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 VDAC1P21796 283 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 MUTP22033 750 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CD1BP29016 333 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ADORA2BP29275 332 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CTRLP40313 264 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 MAGEA4P43358 317 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 RPL29P47914 159 aaKnown RBP1.87□□□□□ -2.11
VPS26A-208ENST00000497022 STARP49675 285 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 CASP9P55211 416 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 PFN3P60673 137 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 SSTP61278 116 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 GALK2Q01415 458 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TEFQ10587 303 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ZP4Q12836 540 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ZSWIM7Q19AV6 140 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 LIPKQ5VXJ0 399 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 STAC2Q6ZMT1 411 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 GOLGA7Q7Z5G4 137 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 C17orf82Q86X59 251 aaPredicted RBP1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TMCO5AQ8N6Q1 288 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TPRX1Q8N7U7 411 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 C20orf203Q8NBC4 194 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 SUMF2Q8NBJ7 301 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF540Q8NDQ6 660 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ST7LQ8TDW4 575 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 PHYHIPQ92561 330 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 TADA1Q96BN2 335 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 ANKMY1Q9P2S6 941 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 GHRLQ9UBU3 117 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 SMC3Q9UQE7 1217 aa1.87□□□□□ -2.11
VPS26A-208ENST00000497022 DOCK9Q9BZ29 2069 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 PTCH1Q13635 1447 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 TRBV6-6A0A0A6YYG2 114 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 A0A1W2PQ67 120 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 A0A1W2PRV1 198 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 FBLL1A6NHQ2 334 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 TRAF3IP2O43734 574 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF324O75467 553 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 IGHV3-48P01763 117 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SLC35G4P0C7Q5 338 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 HNRNPA2B1P22626 353 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 HTR1EP28566 365 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 UGT1A5P35504 534 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 NUDT1P36639 197 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 BTDP43251 543 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 DHPSP49366 369 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 EMDP50402 254 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 HERVK_113P63132 956 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ERVK-8P63133 956 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 MRPS6P82932 125 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 PLOD1Q02809 727 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SRYQ05066 204 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 C17orf67Q0P5P2 114 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF154Q13106 437 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 GPNMBQ14956 572 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 UBE2V2Q15819 145 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 LRIT3Q3SXY7 679 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SLX4IPQ5VYV7 408 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 BTNL3Q6UXE8 466 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 DLEU7Q6UYE1 221 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF562Q6V9R5 426 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 NET1Q7Z628 596 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SERPINA9Q86WD7 417 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SNX32Q86XE0 403 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 UNC45BQ8IWX7 931 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 BPIFB2Q8N4F0 458 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 OR2AP1Q8NGE2 309 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 WDR36Q8NI36 951 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 RDH5Q92781 318 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 PTP4A1Q93096 173 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 VMP1Q96GC9 406 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 TXN2Q99757 166 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ERVK-6Q9BXR3 956 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 FANCFQ9NPI8 374 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 MMP26Q9NRE1 261 aa1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ARGLU1Q9NWB6 273 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF223Q9UK11 482 aaPredicted RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SAMD4AQ9UPU9 718 aaKnown RBP1.86□□□□□ -2.11
VPS26A-208ENST00000497022 SCML2Q9UQR0 700 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms