RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SAGE2PA6NJ88 616 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ZSCAN5BA6NJL1 495 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 SLC9B1P1A6NJY1 282 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 H3BTX0 84 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 TBL1XO60907 577 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 CABYRO75952 493 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 NDUFA7O95182 113 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 BAG2O95816 211 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 SLC4A1P02730 911 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 SEMG1P04279 462 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 STSP08842 583 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ZNF17P17021 662 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ZNF32P17041 273 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 PTPN6P29350 595 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 HSPA1LP34931 641 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 CAV2P51636 162 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 OTUD4Q01804 1114 aaKnown RBP2.45□□□□□ -2.02
CD46-218ENST00000496723 ZNF154Q13106 437 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ELAVL3Q14576 367 aaKnown RBP2.45□□□□□ -2.02
CD46-218ENST00000496723 KHDRBS2Q5VWX1 349 aaKnown RBP2.45□□□□□ -2.02
CD46-218ENST00000496723 STAC2Q6ZMT1 411 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 TMEM26Q6ZUK4 368 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 MIER3Q7Z3K6 550 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 VPS36Q86VN1 386 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 MKXQ8IYA7 352 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ANKRD49Q8WVL7 239 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 NEIL2Q969S2 332 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ELMO2Q96JJ3 720 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 ATP6V0BQ99437 205 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 WRAP53Q9BUR4 548 aaKnown RBP2.45□□□□□ -2.02
CD46-218ENST00000496723 SPRR3Q9UBC9 169 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 IL20RAQ9UHF4 553 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 NEU3Q9UQ49 428 aa2.45□□□□□ -2.02
CD46-218ENST00000496723 CFAP73A6NFT4 308 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 C19orf81C9J6K1 198 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 E9PMD0 336 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 K7ENP7 123 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 SGK494L7N484 410 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 MMP23AO75900 390 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 GSTT2P0CG29 244 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 GSTT2BP0CG30 244 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 RALAP11233 206 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 VDRP11473 427 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 VDAC1P21796 283 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 GABRR1P24046 479 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 ADORA2BP29275 332 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 RPL4P36578 427 aaKnown RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 DHPSP49366 369 aaPredicted RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 RND3P61587 244 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 SNX1Q13596 522 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 TFDP1Q14186 410 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 DPYSL3Q14195 570 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 CCDC40Q4G0X9 1142 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 DCST2Q5T1A1 773 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 OR6B2Q6IFH4 312 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 SULT1C3Q6IMI6 304 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 RABEPKQ7Z6M1 372 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 IFNEQ86WN2 208 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 NFAM1Q8NET5 270 aaPredicted RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 FGGYQ96C11 551 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 SMIM14Q96QK8 99 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 RUFY1Q96T51 708 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 TBC1D10AQ9BXI6 508 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 XPO4Q9C0E2 1151 aaKnown RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 THAP9Q9H5L6 903 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 TMEM231Q9H6L2 316 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 KAT8Q9H7Z6 458 aaKnown RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 MYOZ2Q9NPC6 264 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 TRPV5Q9NQA5 729 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 CNOT2Q9NZN8 540 aaKnown RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 OR1A1Q9P1Q5 309 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 ONECUT1Q9UBC0 465 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 P2RX2Q9UBL9 471 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 PLA2G4CQ9UP65 541 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 NUDCQ9Y266 331 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.44□□□□□ -2.02
CD46-218ENST00000496723 CDC42BPBQ9Y5S2 1711 aa2.44□□□□□ -2.02
CD46-218ENST00000496723 TMEM110-MUSTN1A8MSY1 372 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 TRIM3O75382 744 aaPredicted RBP2.43□□□□□ -2.02
CD46-218ENST00000496723 BCAS2O75934 225 aaPredicted RBP2.43□□□□□ -2.02
CD46-218ENST00000496723 TIMP1P01033 207 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 IGKV3-11P04433 115 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 HPNP05981 417 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 ASNSP08243 561 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 OR8U8P0C7N1 319 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 ZNF853P0CG23 659 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 SFNP31947 248 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 RPL29P47914 159 aaKnown RBP2.43□□□□□ -2.02
CD46-218ENST00000496723 STARP49675 285 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 LIM2P55344 173 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 RPL8P62917 257 aaKnown RBP2.43□□□□□ -2.02
CD46-218ENST00000496723 MRPS11P82912 194 aaKnown RBP2.43□□□□□ -2.02
CD46-218ENST00000496723 VLDLRP98155 873 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 AP1B1Q10567 949 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 FUT7Q11130 342 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 EOGTQ5NDL2 527 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 FAM120AOSQ5T036 256 aa2.43□□□□□ -2.02
CD46-218ENST00000496723 IL34Q6ZMJ4 242 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms