RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ATP12AP54707 1039 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 MLLT10P55197 1068 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 PMP22Q01453 160 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 HYAL4Q2M3T9 481 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 GRAMD1BQ3KR37 738 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 GCNT6Q5T4J0 391 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 BNC2Q6ZN30 1099 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 LRRC74BQ6ZQY2 392 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 ARPINQ7Z6K5 226 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 MISPQ8IVT2 679 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 METTL25Q8N6Q8 603 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 OR8J3Q8NGG0 315 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 OR1J4Q8NGS1 313 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 OR4C3Q8NH37 302 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 NR4A3Q92570 626 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 TTTY12Q9BZ98 90 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 CACYBPQ9HB71 228 aaKnown RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 PROK2Q9HC23 129 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 GALNT9Q9HCQ5 603 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 ASF1BQ9NVP2 202 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 FBXO34Q9NWN3 711 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 AP3M1Q9Y2T2 418 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 A0A1W2PQD3 144 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 PINLYPA6NC86 204 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 C5orf58C9J3I9 102 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 SNPHO15079 494 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 NDUFB5O43674 189 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 H6PDO95479 791 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 PTGDSP41222 190 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 MNAT1P51948 309 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 PPIAP62937 165 aaKnown RBP15.64■□□□□ 0.09
HDAC6-235ENST00000495515 C17orf67Q0P5P2 114 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 FOXO1Q12778 655 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 CAPRIN1Q14444 709 aaKnown RBP15.64■□□□□ 0.09
HDAC6-235ENST00000495515 GPR68Q15743 365 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 TIGD3Q6B0B8 471 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 ZAR1Q86SH2 424 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF619Q8N2I2 560 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 HOPXQ9BPY8 73 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-235ENST00000495515 A4GALTQ9NPC4 353 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 QPCTLQ9NXS2 382 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 FLRT3Q9NZU0 649 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 PPP4R1LQ9P1A2 415 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 TAGLN3Q9UI15 199 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 MKLN1Q9UL63 735 aa15.64■□□□□ 0.09
HDAC6-235ENST00000495515 SMG1Q96Q15 3661 aaKnown RBP15.64■□□□□ 0.09
HDAC6-235ENST00000495515 KIAA0513O60268 411 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 FCMRO60667 390 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 TNFRSF21O75509 655 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 GLSO94925 669 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 ANGPTL1O95841 491 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 BCHEP06276 602 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 TFPTP0C1Z6 253 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 RFC3P40938 356 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 NUDT2P50583 147 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 MTPNP58546 118 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 FUT5Q11128 374 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 KRT72Q14CN4 511 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 SYPL1Q16563 259 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 CYP51A1Q16850 503 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF630Q2M218 657 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 KRTCAP3Q53RY4 240 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 PRR30Q53SZ7 412 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 PRAMEF8Q5VWM4 474 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 PRAMEF7Q5VXH5 474 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 AP1ARQ63HQ0 302 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 TYW3Q6IPR3 259 aaKnown RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 NANOGP8Q6NSW7 305 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 HACD2Q6Y1H2 254 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 FRRS1Q6ZNA5 592 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 MARCH3Q86UD3 253 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 PLCZ1Q86YW0 608 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 FAM109AQ8N4B1 249 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF614Q8N883 585 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 ANKFN1Q8N957 763 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 SLC38A5Q8WUX1 472 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 NTNG2Q96CW9 530 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 BARD1Q99728 777 aaKnown RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 ECSITQ9BQ95 431 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 SPATA9Q9BWV2 254 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 SAP130Q9H0E3 1048 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 IKZF5Q9H5V7 419 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 TMEM38AQ9H6F2 299 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 MTHFD2LQ9H903 347 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-235ENST00000495515 NANOGQ9H9S0 305 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 NTNG1Q9Y2I2 539 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 DTNAQ9Y4J8 743 aa15.63■□□□□ 0.09
HDAC6-235ENST00000495515 A0A0G2JPF8 293 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 PRAMEF27A3QJZ7 478 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 LRRC3CA6NJW4 275 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 FAM166BA8MTA8 275 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 HNRNPCL2B2RXH8 293 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 HNRNPCL3B7ZW38 293 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPA5E9PKD4 350 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPB9F8W1W9 429 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 FXYD1O00168 92 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 GNB5O14775 395 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 HNRNPCL1O60812 293 aaKnown RBP15.62■□□□□ 0.09
HDAC6-235ENST00000495515 CBR3O75828 277 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 HNRNPCL4P0DMR1 293 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms