RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	DHRS4L2	Q6PKH6	230 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	CBLL1	Q75N03	491 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	EIF3M	Q7L2H7	374 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	OR4N2	Q8NGD1	307 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	OR52P1P	Q8NH57	321 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	SNRNP27	Q8WVK2	155 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PSMF1	Q92530	271 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PROX1	Q92786	737 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	UTP4	Q969X6	686 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	EFHD2	Q96C19	240 aa	Predicted RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	RSRC1	Q96IZ7	334 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	ADO	Q96SZ5	270 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	UTP23	Q9BRU9	249 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PINK1	Q9BXM7	581 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	TBL1XR1	Q9BZK7	514 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PCDHAC1	Q9H158	963 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	MAGIX	Q9H6Y5	334 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	RUBCNL	Q9H714	662 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	YY1AP1	Q9H869	796 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	SDHAF3	Q9NRP4	125 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	DCAF13	Q9NV06	445 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	STMN3	Q9NZ72	180 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	CNIH4	Q9P003	139 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	MKLN1	Q9UL63	735 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	RAX	Q9Y2V3	346 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	DTNA	Q9Y4J8	743 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	URB1	O60287	2271 aa	Known RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	C1QTNF9B	B2RNN3	333 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ALG1L2	C9J202	215 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	NPIPB9	F8W1W9	429 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973		M0QX08	132 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	FCMR	O60667	390 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	CEACAM4	O75871	244 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	MFN2	O95140	757 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	SERPINA1	P01009	418 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ITGB2	P05107	769 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	C1QTNF9	P0C862	333 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	CYP4B1	P13584	511 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	NID1	P14543	1247 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	NCK1	P16333	377 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	SOX3	P41225	446 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ACTR3	P61158	418 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	SELENOW	P63302	87 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	MAPK11	Q15759	364 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF791	Q3KP31	576 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	CYBRD1	Q53TN4	286 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF311	Q5JNZ3	666 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZFP1	Q6P2D0	407 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	SPATA24	Q86W54	205 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF440	Q8IYI8	595 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	PRR22	Q8IZ63	422 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	CYP4Z2P	Q8N1L4	340 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	KDF1	Q8NAX2	398 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	FAM13C	Q8NE31	585 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	GEMIN6	Q8WXD5	167 aa	Known RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	STMN2	Q93045	179 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	DOHH	Q9BU89	302 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	TIMMDC1	Q9NPL8	285 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	USP22	Q9UPT9	525 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	SLC9A8	Q9Y2E8	581 aa		12.46	□□□□□ -0.41
APTX-231	ENST00000494973	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.46	□□□□□ -0.41
APTX-231	ENST00000494973	EXPH5	Q8NEV8	1989 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	PCSK5	Q92824	1860 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	PRAMEF25	A6NGN4	478 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	MKRN2OS	H3BPM6	223 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	UGT2B11	O75310	529 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	UGT2B17	O75795	530 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	OXSR1	O95747	527 aa	Predicted RBP	12.45	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF682	O95780	498 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	IGKV1D-16	P01601	117 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	UQCRB	P14927	111 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	ATP6V1B2	P21281	511 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	EVI2B	P34910	448 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	ADH7	P40394	386 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	CCL11	P51671	97 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	MS4A2	Q01362	244 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	RHD	Q02161	417 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	OC90	Q02509	493 aa	Predicted RBP	12.45	□□□□□ -0.42
APTX-231	ENST00000494973	KCNC4	Q03721	635 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	FGFBP1	Q14512	234 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	FAM98B	Q52LJ0	330 aa	Known RBP	12.45	□□□□□ -0.42
APTX-231	ENST00000494973	IFI44L	Q53G44	452 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	SLC30A6	Q6NXT4	461 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	LYPD8	Q6UX82	237 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	SPPL2C	Q8IUH8	684 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	BEST3	Q8N1M1	668 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF614	Q8N883	585 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	TOR1AIP2	Q8NFQ8	470 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	HGD	Q93099	445 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	TAMM41	Q96BW9	452 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	METTL7A	Q9H8H3	244 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	LIN28A	Q9H9Z2	209 aa	Known RBP	12.45	□□□□□ -0.42
APTX-231	ENST00000494973	ANAPC2	Q9UJX6	822 aa		12.45	□□□□□ -0.42
APTX-231	ENST00000494973	CPAMD8	Q8IZJ3	1885 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	AKAP13	Q12802	2813 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	TCRBV3S1	A0A5B6	114 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	DHRS12	A0PJE2	317 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms