RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 HK1P19367 917 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 TBXA2RP21731 343 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 TIMP3P35625 211 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 GFRA1P56159 465 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 HBA1P69905 142 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 SLC25A35Q3KQZ1 300 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 GRAMD1BQ3KR37 738 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 RAET1LQ5VY80 246 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 NXNQ6DKJ4 435 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 OR4F3Q6IEY1 312 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 MISPQ8IVT2 679 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 FADS6Q8N9I5 356 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 ZNF527Q8NB42 609 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 OR2M3Q8NG83 312 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 OR4A15Q8NGL6 344 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 FAM110BQ8TC76 370 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 ZPLD1Q8TCW7 415 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 CDS1Q92903 461 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 LRRC46Q96FV0 321 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 ZBTB18Q99592 522 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 SPOCK3Q9BQ16 436 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 CALHM2Q9HA72 323 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 FLRT3Q9NZU0 649 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 MED11Q9P086 117 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 Q9UFV3 132 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 RPH3AQ9Y2J0 694 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-211ENST00000494800 PRSS51A0A1B0GVH4 220 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 NKX2-6A6NCS4 301 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 CD8B2A6NJW9 211 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 ALG1L2C9J202 215 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 E9PBE3 544 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 SDHDO14521 159 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 DVL2O14641 736 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 OXSR1O95747 527 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 SNRPB2P08579 225 aaKnown RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 S100A3P33764 101 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 ADH7P40394 386 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 OCRLQ01968 901 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 SRYQ05066 204 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 DCST1Q5T197 706 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 CHMP1BQ7LBR1 199 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 GDF7Q7Z4P5 450 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 GALNT10Q86SR1 603 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 WDR75Q8IWA0 830 aaKnown RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 MCEMP1Q8IX19 187 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 OR5AK3PQ8NH89 298 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 GOT1L1Q8NHS2 421 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 PIWIL2Q8TC59 973 aaKnown RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 NUDT8Q8WV74 236 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 OTUB1Q96FW1 271 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-211ENST00000494800 PIGQQ9BRB3 760 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 UCK2Q9BZX2 261 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 SLC24A3Q9HC58 644 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 GPATCH2Q9NW75 528 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 STOML1Q9UBI4 398 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 UNC79Q9P2D8 2635 aa16.01■□□□□ 0.15
HDAC4-211ENST00000494800 NCKAP5O14513 1909 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 IGLV3-32A0A0A0MS00 114 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 GOLGA8QA0A0J9YX86 632 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 RNF103-CHMP3A0A140T963 221 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 GOLGA8OA6NCC3 632 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 GOLGA8NF8WBI6 632 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 H3BNH8 94 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 C19orf84I3L1E1 186 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 ZIC3O60481 467 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 TCEA1P23193 301 aaKnown RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 MSX1P28360 303 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 EPHA3P29320 983 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 EEFSECP57772 596 aaKnown RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 LRRC74AQ0VAA2 488 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 BCL2A1Q16548 175 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 GLYR1Q49A26 553 aaPredicted RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 EXOSC6Q5RKV6 272 aaKnown RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 DCST2Q5T1A1 773 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 CLECL1Q8IZS7 167 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 OR4C3Q8NH37 302 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 LRRC8CQ8TDW0 803 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 ZNF75CPQ92670 426 aaPredicted RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 ARL8AQ96BM9 186 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 C1GALT1C1Q96EU7 318 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 WDR55Q9H6Y2 383 aaPredicted RBP16■□□□□ 0.15
HDAC4-211ENST00000494800 VIPAS39Q9H9C1 493 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 AIG1Q9NVV5 245 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 DNAJC13O75165 2243 aa16■□□□□ 0.15
HDAC4-211ENST00000494800 A0A087WZY1 265 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 TOXO94900 526 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 AGR2O95994 175 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 AK1P00568 194 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 PEPDP12955 493 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 IDO1P14902 403 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 POU3F2P20265 443 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-211ENST00000494800 MATN1P21941 496 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 FAM174BQ3ZCQ3 159 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 SPANXN4Q5MJ08 99 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 CCNJQ5T5M9 372 aa15.99■□□□□ 0.15
HDAC4-211ENST00000494800 MEX3BQ6ZN04 569 aaKnown RBP15.99■□□□□ 0.15
HDAC4-211ENST00000494800 C6orf120Q7Z4R8 191 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms