RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 EBF4Q9BQW3 602 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 SLC35A5Q9BS91 424 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 PTGES2Q9H7Z7 377 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 RMND5AQ9H871 391 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 HHATLQ9HCP6 504 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 SDR39U1Q9NRG7 319 aaPredicted RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 UBQLN4Q9NRR5 601 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 FBXO34Q9NWN3 711 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 TAS2R10Q9NYW0 307 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 MED11Q9P086 117 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 PLEKHB1Q9UF11 243 aaPredicted RBP14.51□□□□□ -0.09
LIME1-209ENST00000494776 HRH3Q9Y5N1 445 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 KCNE3Q9Y6H6 103 aa14.51□□□□□ -0.09
LIME1-209ENST00000494776 SPTAN1Q13813 2472 aaKnown RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 HIVEP3Q5T1R4 2406 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 CCDC154A6NI56 674 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 C17orf51A8MQB3 221 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 NDUFB5O43674 189 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 GMFGO60234 142 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 WDR1O75083 606 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 OXSR1O95747 527 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 GABRA1P14867 456 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 TBXA2RP21731 343 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 TCEA1P23193 301 aaKnown RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 DPP4P27487 766 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 POLR2JP52435 117 aaKnown RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 DSCR4P56555 118 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 ADORA2A-AS1P86434 159 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 C17orf67Q0P5P2 114 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 ATAD3BQ5T9A4 648 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 XKRXQ6PP77 449 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 MAMDC2Q7Z304 686 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 ZAR1Q86SH2 424 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 IFNEQ86WN2 208 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 ZNF808Q8N4W9 903 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 ZNF527Q8NB42 609 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 OR4C3Q8NH37 302 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 PHF10Q8WUB8 498 aaKnown RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 ITLN2Q8WWU7 325 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 ABTB1Q969K4 478 aaPredicted RBP14.5□□□□□ -0.09
LIME1-209ENST00000494776 DMRTA2Q96SC8 542 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 TIMP4Q99727 224 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 INPP5KQ9BT40 448 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 OR2B2Q9GZK3 357 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 HOXD1Q9GZZ0 328 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 OR51I1Q9H343 314 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 MED4Q9NPJ6 270 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 EXD2Q9NVH0 621 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 COQ3Q9NZJ6 369 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 CAMK2AQ9UQM7 478 aa14.5□□□□□ -0.09
LIME1-209ENST00000494776 NCKAP5O14513 1909 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 FAM234BA2RU67 622 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 ALG1L2C9J202 215 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 RFXANKO14593 260 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 ADAM10O14672 748 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 EDF1O60869 148 aaKnown RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 ANP32DO95626 131 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 CLDN1O95832 211 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 AGR2O95994 175 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 ACTL6AO96019 429 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 NGFRP08138 427 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 HOXD4P09016 255 aaPredicted RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 BMP7P18075 431 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 KHKP50053 298 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 CRYZQ08257 329 aaKnown RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 PMPCAQ10713 525 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 GTF3C1Q12789 2109 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 FLYWCH1Q4VC44 716 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 SAXO2Q658L1 398 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 VASNQ6EMK4 673 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 AAGABQ6PD74 315 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 B3GNT6Q6ZMB0 384 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 C16orf62Q7Z3J2 963 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 PM20D2Q8IYS1 436 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 GATSQ8NAP1 163 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 OR2M3Q8NG83 312 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 OR10Q1Q8NGQ4 319 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 OR9I1Q8NGQ6 314 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 GOT1L1Q8NHS2 421 aaPredicted RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 XAGE5Q8WWM1 108 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 RND1Q92730 232 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 SFXN2Q96NB2 322 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 UGT2B28Q9BY64 529 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 RTN4RQ9BZR6 473 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 NPHS2Q9NP85 383 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 DCTN4Q9UJW0 460 aa14.49□□□□□ -0.09
LIME1-209ENST00000494776 RPH3AQ9Y2J0 694 aaPredicted RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 USP9YO00507 2555 aaPredicted RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 USP9XQ93008 2570 aaPredicted RBP14.49□□□□□ -0.09
LIME1-209ENST00000494776 ATP8B1O43520 1251 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 AK1P00568 194 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 GSNP06396 782 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 OR12D1P0DN82 309 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 HK1P19367 917 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 DCTP40126 519 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 CDKN2CP42773 168 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 ANXA11P50995 505 aaKnown RBP14.48□□□□□ -0.09
LIME1-209ENST00000494776 GANABQ14697 944 aaKnown RBP14.48□□□□□ -0.09
LIME1-209ENST00000494776 SF3B4Q15427 424 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIME1-209ENST00000494776 TIGD2Q4W5G0 525 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms