RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
APTX-230ENST00000494649 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
APTX-230ENST00000494649 ZNF407Q9C0G0 2248 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 A0A096LPI6 279 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 J3QKU1 62 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 FADS1O60427 444 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 GLSO94925 669 aaPredicted RBP10.15□□□□□ -0.78
APTX-230ENST00000494649 CBX6O95503 412 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 ANGPTL1O95841 491 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 BCHEP06276 602 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 KRT16P08779 473 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 DCTP40126 519 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 LRRC74AQ0VAA2 488 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 SELPLGQ14242 412 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 CD226Q15762 336 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 ATAD3BQ5T9A4 648 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 REP15Q6BDI9 236 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 DLEU7Q6UYE1 221 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 MSANTD1Q6ZTZ1 278 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 YRDCQ86U90 279 aaKnown RBP10.15□□□□□ -0.78
APTX-230ENST00000494649 TREML1Q86YW5 311 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 FAM110BQ8TC76 370 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 ROPN1LQ96C74 230 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 GPR137Q96N19 417 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 SECISBP2Q96T21 854 aaKnown RBP10.15□□□□□ -0.78
APTX-230ENST00000494649 G6PC3Q9BUM1 346 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 LDAHQ9H6V9 325 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 PPP4R1LQ9P1A2 415 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 PCDHGB3Q9Y5G1 929 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 MED12Q93074 2177 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 ZGRF1Q86YA3 2104 aa10.15□□□□□ -0.78
APTX-230ENST00000494649 ANKRD33BA6NCL7 494 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 DUXAA6NLW8 204 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CLDN24A6NM45 220 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SCDO00767 359 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SNX4O95219 450 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 H6PDO95479 791 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 KRT75O95678 551 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 HOXB9P17482 250 aaPredicted RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 GAS1P54826 345 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CHRNEQ04844 493 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 ELOAQ14241 798 aaKnown RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 RGNQ15493 299 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.14□□□□□ -0.79
APTX-230ENST00000494649 EIPR1Q53HC9 387 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 WIPI1Q5MNZ9 446 aaPredicted RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 TBCELQ5QJ74 424 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 PDZK1Q5T2W1 519 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 TIGD3Q6B0B8 471 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SLC30A6Q6NXT4 461 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 FAM109AQ8N4B1 249 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 OR5M1Q8NGP8 315 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 DNAJB8Q8NHS0 232 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CCT8L2Q96SF2 557 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 DSN1Q9H410 356 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 RUBCNLQ9H714 662 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 EXD2Q9NVH0 621 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 KCNE5Q9UJ90 142 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 OSGIN2Q9Y236 505 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SLC6A5Q9Y345 797 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 TTC36A6NLP5 189 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 NPIPA2E9PIF3 369 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 NPIPA3F8WFD2 350 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 ADAM10O14672 748 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 MRASO14807 208 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 SNPHO15079 494 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 NDUFB5O43674 189 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CYP7B1O75881 506 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CHRM4P08173 479 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 ZCCHC18P0CG32 403 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 NR2F1P10589 423 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 EDN3P14138 238 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CPA2P48052 419 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 DSTNP60981 165 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 HPCAP84074 193 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 CYLC2Q14093 348 aaPredicted RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 MAPK14Q16539 360 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 ARHGAP11BQ3KRB8 267 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 LRIF1Q5T3J3 769 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 TYW3Q6IPR3 259 aaKnown RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 PHOSPHO1Q8TCT1 267 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 MIPOL1Q8TD10 442 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 RCN3Q96D15 328 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 TMEM41AQ96HV5 264 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
APTX-230ENST00000494649 CCDC106Q9BWC9 280 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 UBQLN4Q9NRR5 601 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 B4GALT7Q9UBV7 327 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 TINAGQ9UJW2 476 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 C15orf41Q9Y2V0 281 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 WDR45Q9Y484 360 aa10.14□□□□□ -0.79
APTX-230ENST00000494649 FREM3P0C091 2139 aa10.13□□□□□ -0.79
APTX-230ENST00000494649 AIM2O14862 343 aa10.13□□□□□ -0.79
APTX-230ENST00000494649 OIP5O43482 229 aa10.13□□□□□ -0.79
APTX-230ENST00000494649 CCDC22O60826 627 aa10.13□□□□□ -0.79
APTX-230ENST00000494649 BCAS1O75363 584 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms