RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 UFM1P61960 85 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 PHC1P78364 1004 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 POU6F2P78424 691 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OCRLQ01968 901 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 NHSL2Q5HYW2 709 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 SPANXN4Q5MJ08 99 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
ATG4B-224ENST00000494132 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OLIG3Q7RTU3 272 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 MAVSQ7Z434 540 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 FADS6Q8N9I5 356 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OR56A1Q8NGH5 318 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OR5D16Q8NGK9 328 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 LILRB4Q8NHJ6 448 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 ATP6V1G3Q96LB4 118 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 TEX37Q96LM6 180 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 CHST11Q9NPF2 352 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 GIN1Q9NXP7 522 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 CENPEQ02224 2701 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 NOTCH2Q04721 2471 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 MPDZO75970 2070 aa13.33□□□□□ -0.27
ATG4B-224ENST00000494132 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 H0Y3Z8 333 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 HDAC3O15379 428 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 ZIC3O60481 467 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 OXSR1O95747 527 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 C1QCP02747 245 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 HK1P19367 917 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 GCKP35557 465 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 GFRA1P56159 465 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 C21orf58P58505 322 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 SLC9B1Q4ZJI4 515 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 RAET1LQ5VY80 246 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 CDC73Q6P1J9 531 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 CAMKMTQ7Z624 323 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 MCEMP1Q8IX19 187 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 UBQLNLQ8IYU4 475 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 KIRREL3Q8IZU9 778 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 PSMA8Q8TAA3 256 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 RAB3IL1Q8TBN0 382 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 FAM110BQ8TC76 370 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 ADAMTS15Q8TE58 950 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 ZNF75CPQ92670 426 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 TUBA1CQ9BQE3 449 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 PIGUQ9H490 435 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 SERHL2Q9H4I8 314 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 SDHAF3Q9NRP4 125 aa13.33□□□□□ -0.28
ATG4B-224ENST00000494132 FAF1Q9UNN5 650 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-224ENST00000494132 RNF103-CHMP3A0A140T963 221 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 AHRRA9YTQ3 701 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 SCN2BO60939 215 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 EPPINO95925 133 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 ACTL6AO96019 429 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 AGFG1P52594 562 aaKnown RBP13.32□□□□□ -0.28
ATG4B-224ENST00000494132 DGKQP52824 942 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 DSCR4P56555 118 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-224ENST00000494132 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 SNTB1Q13884 538 aaKnown RBP13.32□□□□□ -0.28
ATG4B-224ENST00000494132 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATG4B-224ENST00000494132 FAM174BQ3ZCQ3 159 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 OGFOD2Q6N063 350 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 ZCCHC12Q6PEW1 402 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 SFXN5Q8TD22 340 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 SLC35G5Q96KT7 338 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 OR7D2Q96RA2 312 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 STACQ99469 402 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 KLHDC3Q9BQ90 382 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 BTBD2Q9BX70 525 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 KCNJ16Q9NPI9 418 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 AIG1Q9NVV5 245 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 PCDHGB3Q9Y5G1 929 aa13.32□□□□□ -0.28
ATG4B-224ENST00000494132 CELSR2Q9HCU4 2923 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 TRPC5OSA6NMA1 111 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 E9PBE3 544 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 H3BML4 177 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 RNASET2O00584 256 aaKnown RBP13.31□□□□□ -0.28
ATG4B-224ENST00000494132 NDUFB5O43674 189 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 HOXD4P09016 255 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-224ENST00000494132 H2AFXP16104 143 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-224ENST00000494132 MATN1P21941 496 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 BMP5P22003 454 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 IL12AP29459 219 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 PTGER4P35408 488 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 LHX2P50458 406 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 CLDN18P56856 261 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 TFF3Q07654 80 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 CD226Q15762 336 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 DCST2Q5T1A1 773 aa13.31□□□□□ -0.28
ATG4B-224ENST00000494132 RIPPLY2Q5TAB7 128 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms